Arvicola amphibius (Eurasian water vole): 119815596
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Entry
119815596 CDS
T08327
Symbol
Lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
aamp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119815596 (Lrrc4c)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119815596 (Lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119815596 (Lrrc4c)
Cell adhesion molecules [BR:
aamp04515
]
Immunoglobulin superfamily
NGL family
119815596 (Lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
119815596
NCBI-ProteinID:
XP_038187722
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All DBs
Position
5:complement(77578498..77614216)
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AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNHVGPTP
VIDWETTNATTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDPPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcaacttcttgtggtggctggt
ctggtccgagctcaaacctgcccttcagtgtgctcctgcagcaaccagttcagcaaggta
atttgtgttcgcaagaaccttcgtgaggttcctgatggcatctccaccaacacaaggctg
ctgaacctccatgagaaccaaatacagatcatcaaagtgaacagcttcaagcacttaagg
cacttggaaatcctccagttgagcaggaatcatattcgaaccattgaaattggggccttc
aatggtttggcgaacctcaacactctggaactctttgacaatcgtcttactaccatcccg
aatggagcttttgtgtatctctctaaactgaaggagctctggttgcgcaacaaccccatt
gaaagcatcccttcctatgcttttaacagaatcccttctttgcgccgcctagacttgggg
gaattaaaaaggctttcttacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaacctccgtgaaatccctaacctcacgccgctcatcaaa
ctggacgaactagatctttctgggaaccatttgtctgccatcagacctggctcttttcag
gggttgatgcaccttcaaaaactgtggatgatacagtctcagattcaagtgattgaacgc
aatgcctttgataacctccagtcattagtggagatcaacctggcacacaacaatctaaca
ttactgcctcatgacctcttcacgcccttgcatcatctagagcggatacaccttcatcac
aacccatggaactgtaactgtgatatcctgtggctcagctggtggatacgagacatggct
ccctcgaacacagcttgttgtgccaggtgtaacactccccccaatctgaaaggaagatat
atcggagagctggaccagaattatttcacatgctatgctccggtgattgtggaaccccct
gcagacctcaatgtcactgaaggcatggcagctgagctaaaatgtcgggcatctacatcc
ctgacttccgtgtcttggattactccaaatggaacagtcatgacccatggggcatacaaa
gtgcggatagctgtgcttagtgatggcacgttaaatttcacaaatgtaactgtgcaagac
acaggcatgtacacatgtatggtgagtaattctgttggcaacactactgcttctgccacc
ttgaatgttacagctgcaaccactactcctttctcttacttttcaactgtaacagtagag
actatggaaccttctcaggacgaggcacgaaccacagataaccatgtgggtcccactcca
gtgattgattgggagactactaacgcaaccacatctcttacgccacagagcacaaggtca
acagagaaaacattcaccatcccagtgactgacatcaacagtggaatcccaggaattgat
gaggtcatgaaaacaaccaaaatcattatcgggtgttttgtggccatcacactcatggct
gctgtgatgctggtcattttctacaagatgaggaagcagcaccatcggcaaaaccaccat
gctccaacaaggactgttgaaatcattaacgtggatgatgagctcactggggatccacct
atggaaagtcacctgcccatgcctgcaattgagcatgagcacctaaaccactataactct
tacaaatctcccttcaaccacacaacaacagtaaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccgaatgaactctaaagacaatgtacaagagactcaaata
taa
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