Arvicola amphibius (Eurasian water vole): 119815688
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Entry
119815688 CDS
T08327
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04068
FoxO signaling pathway
aamp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
119815688 (Rag1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
119815688 (Rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119815688 (Rag1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119815688 (Rag1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119815688 (Rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_10
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
119815688
NCBI-ProteinID:
XP_038187873
LinkDB
All DBs
Position
5:73847586..73850711
Genome browser
AA seq
1041 aa
AA seq
DB search
MAVSLPPTLRLSPAPDEIQHPHMKFSEWKFKLFRVRSFEKAPEEAQKENGPSEENPCLEQ
SPVVPDKPGGQNSAPTQRALKLHPKFSKKFHADGKSRDKTIHQARLRHFCRICGNPFKGD
GHNRRYPVHGPVDAKTQSLFRKKEKRVTSWPVLIARVFRIDVKADVDSIHPTEFCHNCWS
IMYRKFSSAPCEVYFPRNTTMEWHPHTASCDICLPNHQGLKRKRHQPNVQLSKKLKTVLN
QARRDRQRKRVQARVSSKEVMKKLSNCSKIHLSTKLLAVDFPAPFVKAISCQICEHILAD
PVETTCKHVFCRICILRCLKVMGSYCPSCRYPCFPTDLESPAKSFLNILNALMVKCPAQE
CDEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFA
DKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCS
QYHKMYRTVKAITGRQIFQPLHALRNAEKILLPGYHSFEWQPPLKNVSSRTDVGIIDGLS
GLASSVDEYPVDTIAKRFRYDSALVSALMDMEEDILEGMRSQDLDDYLNGPFVVVVKESC
DGMGDVSEKHGSGPAVPEKAVRFSFTIMRITIEHGSQNVKVFEEPKPNSELCCKPLCLML
ADESDHETLTAILSPLIAEREAMKSSELMLEMGGILRTFKFIFRGTGYDEKLVREVEGLE
ASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVKGV
SAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHLRK
RMNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPA
KECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASE
GNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKVSGFTMNSK
ETLGDPLGIEDSLETQDSMEF
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtccttgccacccactctgaggctcagtcctgctcctgatgaaattcagcac
ccacacatgaaattttctgagtggaaatttaagctattcagggtgagatcctttgaaaag
gcacccgaagaagcccaaaaggagaacggtccctcggaggagaacccttgcctagagcag
tctccggtagttccggacaagcctggtggtcagaattcagctccaactcaacgagcactg
aaactacaccctaaattttcaaagaaattccatgctgatgggaagtcaagagacaaaaca
attcaccaagccaggcttagacacttctgccgcatctgtgggaatccattcaagggtgat
gggcataatcggagatacccagtccatgggcctgtggatgccaaaacccaaagccttttc
cgaaagaaggaaaagagagtcacttcctggccagtcctcattgccagagttttccggatt
gatgtgaaggcggatgttgactcgattcaccccactgagttctgccacaactgctggagc
attatgtacaggaagttcagcagtgctccctgtgaggtctacttcccaaggaacacgacc
atggagtggcatccccacacagcatcctgcgacatctgcctgcctaaccaccagggactc
aagaggaagaggcatcagcccaatgtgcagctcagcaagaaactaaaaactgtgctcaac
caagcgagacgggaccgtcagcgcaagcgagttcaggctagggtcagcagtaaggaagtc
atgaagaagctctccaactgcagtaagattcatctgagtaccaaacttcttgcagtggac
ttcccagcaccctttgtgaaagccatctcctgccagatatgtgaacacattctggctgac
cccgtggagaccacctgtaagcacgtattttgcaggatctgcattctccgatgtctcaaa
gtcatgggcagctattgtccctcttgccgatatccgtgcttccctactgacctggagagt
ccagcgaagtcctttctgaacatcttgaatgctctgatggtgaagtgtcctgcacaagag
tgtgatgaggaggtgagtctggaaaagtataaccaccatgtctcaagccacaaagagtcc
aaagagactttggtgcatattaataaagggggccggcctcgtcaacatctcttgtcactg
acacgcagggctcagaaacataggctgagggaactcaagattcaagtcaaggaatttgct
gacaaagaagaaggtggggatgtgaagtctgtgtgcttgacgttgttcctgctggcactg
agggccaggaatgagcacagacaagctgacgagctagaggccatcatgcaggggcggggc
tctggtctgcagccagctgtttgcttggccatacgtgtcaacaccttcctcagctgcagc
cagtaccataagatgtacaggaccgtgaaagctatcacagggaggcagatttttcagcct
ttgcacgctcttcgaaatgctgagaaaatccttctgccaggctaccactcctttgagtgg
cagcctcctctgaagaatgtgtcctccagaacggatgttggcattattgatgggctgtct
ggacttgcctcctctgtggatgaatatccagtggataccattgcgaagaggttccgatat
gattctgctttggtgtctgctttgatggacatggaagaagacattttggaaggaatgaga
tcccaagatcttgatgactacttaaatggccccttcgttgtcgtggtgaaggagtcttgt
gatggaatgggggacgtgagtgagaagcatggcagtgggcctgcggtccccgaaaaggcg
gttcgcttttcattcacaataatgagaattacgatagagcacggctcacagaatgtgaag
gtgtttgaggaacccaagcctaattccgaactgtgttgcaagccgttgtgtcttatgctg
gcggatgagtctgaccatgagaccctgactgccatcctaagccctctcattgctgaaagg
gaggccatgaagagcagtgagttaatgctggagatggggggcatcctcaggactttcaaa
ttcatcttcaggggcactggatatgatgaaaaacttgtccgggaagtagaaggcctggaa
gcctctggctcagtctacatctgtacactttgtgatgccactcgtctggaagcctctcaa
aatcttgtcttccactccataaccagaagccatgctgagaacctggagcgctatgaggtt
tggcggtccaatccctatcatgagtccgtggaagaactccgggaccgggtgaaaggggtt
tctgccaaacctttcattgagacagtcccttctatagatgcactccactgtgacattggc
aacgcagctgaattctataagattttccaactggagataggggaagtgtataaaaatccc
aatgcctctaaagaagaaaggaagagatggcaggccacactggacaaacatctccggaaa
aggatgaacctaaaaccaatcatgaggatgaatggtaactttgcccggaagctgatgacc
caagagactgtagatgcagtttgtgagctaattccttctgaggagaggcacgaagctctc
agggagctgatggacctctacctgaaaatgaaacccgtgtggcgctcatcatgtcctgct
aaagagtgtccagagtccctctgccagtacagtttcaactcacagcgttttgctgagctc
ctctctaccaagttcaaatacagatatgagggcaaaatcactaattattttcacaaaacc
ctggcacatgtccctgaaattattgagagggatggctctattggggcatgggcgagtgaa
gggaatgaatctggtaataaactgtttagacgcttccggaaaatgaatgccaggcagtcc
aagtgctatgagatggaagatgtcctgaaacaccactggctgtatacttctaaatacctc
cagaagtttatgaacgctcataatgcattaaaagtttctggctttaccatgaactcaaag
gagaccttaggggaccctttgggtattgaggactctctggaaacccaagattcaatggag
ttttaa
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