Arvicola amphibius (Eurasian water vole): 119815772
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Entry
119815772 CDS
T08327
Symbol
Ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1
KO
K24730
cytosolic iron-sulfur protein assembly protein CIAO1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119815772 (Ciao1)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119815772 (Ciao1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119815772 (Ciao1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
119815772 (Ciao1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_Vps41
WDR90_beta-prop_4th
NBCH_WD40
eIF2A
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
Beta-prop_HPS5
WD40_RFWD3
PROPPIN
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
RMC1_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
119815772
NCBI-ProteinID:
XP_038187993
LinkDB
All DBs
Position
5:48539328..48545423
Genome browser
AA seq
339 aa
AA seq
DB search
MKDSLVLRSRVPAHPDSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWVCKSVLSEGH
QRTVRKVAWSPCGNYLASASFDAVTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE
GDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS
WKCICTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHMPQ
AHTQDVNCVAWNPKEPGLLASCSDDGEVAFWEYHQPAGL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattcgctggtgctgcggagccgcgtcccggcacacccggactcccgctgctgg
tttctggcctggaaccccacggggaccctgctggcctcgtgcggcggcgaccgtaaaatc
cgcatctggggcaccgagggtgacagctgggtttgcaagtctgtcctttctgaaggccac
cagcgcactgttcggaaagtggcatggtccccctgtggaaactacctggcctctgccagc
tttgatgctgtcacttgtatttggaagaagaaccaggatgactttgagtgtgtaaccact
ctcgagggtcacgaaaatgaggtcaagtcagtggcttgggccccgtctggcaacctcttg
gctacctgcagcagagataagagtgtgtgggtctgggaagttgacgaagaggatgagtat
gagtgtgtcagtgtcctcaactctcacacacaggacgtcaagcacgtggtttggcacccg
agccaggagcttttagcgtccgccagctatgacgacacagtgaagttgtaccaggaagaa
ggagatgactgggtctgctgtgccacccttgaaggtcatgagtccactgtgtggagcttg
gccttcgaccccagtggccagcgcctggcatcctgcagtgatgaccgtactgtgcgcatt
tggcgccagtatctaccaggcaatgaacaaggggtggcatgcagtggctctgaccccagc
tggaagtgtatctgcactttgtcaggcttccacaccaggaccatctacgacgttgcttgg
tgtcagctgacaggggccctggctacagcttgtggggacgatgccatccgagtgtttgag
gaggatcccggctcagatccacagcagcctaccttctctctgacagctcatatgccccag
gcgcacacccaggatgtcaactgtgtggcttggaatcccaaggagccagggctcctggcc
tcttgtagtgatgatggggaggtggccttctgggagtatcaccaacctgcaggcctctga
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integrated database retrieval system
