Arvicola amphibius (Eurasian water vole): 119815836
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Entry
119815836 CDS
T08327
Symbol
Sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119815836 (Sox6)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119815836 (Sox6)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119815836
NCBI-ProteinID:
XP_038188074
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All DBs
Position
1:complement(117442747..117814339)
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AA seq
863 aa
AA seq
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MMWLGEEQLEVSRTPAISRVKIQCFDRQRLLFLGRMSSKQATSPFACTTDGEETMTQDLT
SREKEEGSDQHAASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNK
LCSLYSFRNTSTSPHKPDEGSREREIMSSVTFGTPERRKGSLADVVDTLKQKKLEEMTRS
EQEDSSCMEKLLSKDWKEKMERLNTSDLLGEIKGTPESLAEKERQLSTMITQLISLREQL
LAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHM
PPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQ
LQKGHVSHPQTNPRLKGISDRFGRNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAK
MPSTPQPPNTAGAVSPTGMKNEKRGTSPVTQVKDETAAQPLNLSSRPKTAEPVKSPTSPT
QSLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEAR
KMREQIQREQQQQPHGVDGKLSSMNNMGLSNCRNEKERTRFENLGPQLTGKSGEDGKLGP
GVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPM
NAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKY
PNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPG
AITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKMDGASLAGNDMINGEDEMEAYD
DYEDDPKSDYSSENEAPEPVSAN
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggcttggagaggagcagcttgaggtatccaggacacctgcaattagcagagtg
aaaatccaatgttttgacagacaaagacttttgtttctcggaagaatgtcttccaagcaa
gccacctctccatttgcctgtacaactgatggagaggaaacaatgacccaggatttgacc
tcaagggaaaaggaagagggcagtgaccaacatgcggcctcccatctgcctctgcacccc
ataatgcacaacaaacctcactctgaggagctaccgacgcttgtcagtaccattcaacaa
gatgctgactgggacagcgttctgtcatctcagcaaagaatggagtcagagaataataag
ttatgttccctatattccttccgaaatacgtctacctcaccacataagcctgatgaaggg
agtcgggagcgcgagataatgagcagtgttacttttggaaccccggaacgccgcaaaggg
agccttgccgacgtggtggatacgctgaagcagaagaagctggaggagatgactcggtcg
gaacaagaggattcctcctgcatggaaaaactactttcaaaagattggaaggaaaaaatg
gaaagactaaatacgagtgaccttcttggagaaatcaaaggtactcctgagagcctagca
gagaaggaacgccagctctccaccatgatcacccagctcatcagcttgcgggagcagctc
ctggcagcgcacgatgaacagaaaaagctggcagcctcacagatcgagaaacagcggcag
caaatggaccttgctcgccaacaacaagaacagatcgcaagacaacagcagcaacttctc
cagcagcagcacaagattaatctcctgcagcaacagatccagcaggttcaggggcacatg
cctccgctcatgatcccaatttttccacatgaccagcggaccctggcagcagctgctgcc
gcccaacagggattcctcttcccccctggaataacatacaagccaggtgataactacccc
gtacagttcattccgtcaacaatggcagctgctgctgcttctggactcagccctttacag
ctccagaagggtcatgtctcccacccacaaactaacccaaggctaaagggcataagtgac
cgttttggcaggaatttggacacctttgaacatggtggtggccactcttacaaccacaaa
cagattgagcagctctatgccgctcagctggccagcatgcaggtgtcacctggagcaaag
atgccatcaactccacagccaccaaacacagcaggggcggtctcacctactgggatgaaa
aatgaaaagagagggaccagccctgtaactcaagttaaggatgaaacagcagcccagccg
ctgaatctctcatcacggcctaaaacagcagagcctgtgaagtccccaacatctcccacc
cagagcctcttcccagccagcaaaaccagccctgtcaaccttccgaacaagagcagcatc
cccagccccattggagggagcctggggagaggatcctctctagatatcctgtccagtctc
aactctcctgccctgtttggggaccaggacacagtgatgaaagccattcaggaggctcgg
aagatgcgagagcagatccagcgggagcagcaacagcagccacacggggtcgatgggaaa
ctgtcttccatgaacaacatgggtctgagcaactgcaggaatgagaaggaaagaacacgc
tttgagaacttggggccccagttaacagggaagtcaggtgaagatgggaagctgggccca
ggagtcatcgatctcactcggccagaagacgcagagggaagcaaagcaatgaatggctct
gcagctaaactacagcagtattattgttggccaacaggaggcgccactgtggctgaagca
cgcgtctacagggatgcccgcggccgtgccagcagcgagcctcacatcaagcgaccaatg
aatgcgttcatggtttgggcgaaggacgaaaggaggaaaattcttcaggctttccctgac
atgcataactccaacattagcaaaatcttaggatctcgctggaaatccatgtccaaccag
gagaagcaaccttactatgaagaacaggcccggctaagcaagatccacctagagaagtac
ccaaattacaagtacaaaccccggccgaaacgcacgtgcatcgtggatggcaagaagctc
cggattggagagtacaagcaactgatgcgctcccggaggcaggagatgagacagttcttc
actgttgggcaacagcctcagattcccatcaccacaggaacaggtgttgtgtatcctggt
gctattactatggcaacgaccacaccatcacctcagatgacatctgactgctctagcacc
tctgccagcccagagcccagcctccctgtcatccagagcacgtatggtatgaagatggac
ggcgcaagcctggctgggaacgacatgattaatggagaggatgaaatggaagcctatgac
gactacgaagatgatcccaaatcagactatagcagcgaaaacgaggccccggagcctgtc
agtgccaactga
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