Arvicola amphibius (Eurasian water vole): 119816041
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Entry
119816041 CDS
T08327
Symbol
Ifne
Name
(RefSeq) interferon epsilon
KO
K05442
interferon epsilon
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04060
Cytokine-cytokine receptor interaction
aamp04622
RIG-I-like receptor signaling pathway
aamp04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
119816041 (Ifne)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119816041 (Ifne)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119816041 (Ifne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
aamp04052
]
119816041 (Ifne)
Cytokines and neuropeptides [BR:
aamp04052
]
Cytokines
Interferons
119816041 (Ifne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
EBV-NA3
Motif
Other DBs
NCBI-GeneID:
119816041
NCBI-ProteinID:
XP_038188226
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All DBs
Position
6:57471522..57472146
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AA seq
192 aa
AA seq
DB search
MIHLQLPEMVLLLLASSTLSSLEPKLLLFPSRMNGESLQLLKTLPFSSVLQCLAHRKNFQ
LPQQAVSRHQDQKGHALAVLHETLQQIFILYWTHVSPGAWEENHMERILAVLHQQLKYVE
SLTGLQAEQKSGSLSVQNLRLQIKAYFRRIHDYLENQRSNSCAWIIVQGEVNRCMFFVLR
LTGWLSKQEPDP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgattcacctacagctccctgaaatggtgctgctgctcttggcttcttccacgctctcc
tccctagaaccgaaactgcttctcttcccgtcaagaatgaacggggaaagtttacagcta
ctgaaaactttgcccttctcatcagtcctgcagtgtctagcacacaggaagaatttccag
cttcctcagcaggctgtgagccgacaccaggaccagaagggacatgccctggccgttctg
cacgagacccttcagcagatcttcatcctctactggacacatgtttctcccggtgcttgg
gaggaaaaccacatggaaagaatcctagcggtgcttcaccaacagctgaaatacgtggag
tcactaactggactacaagcggagcagaagagcggtagcttgagtgtgcagaaccttagg
ttacagattaaagcgtacttcaggaggatccacgactacctggaaaaccagaggtccaac
agctgtgcctggatcattgtccagggagaagtcaatcgctgtatgttcttcgtgctcagg
ctcacaggatggctgagcaaacaagaaccagacccttga
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