Arvicola amphibius (Eurasian water vole): 119816046
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Entry
119816046 CDS
T08327
Symbol
Heatr1
Name
(RefSeq) HEAT repeat-containing protein 1 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119816046 (Heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamp03009
]
119816046 (Heatr1)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119816046 (Heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
119816046
NCBI-ProteinID:
XP_038188230
LinkDB
All DBs
Position
6:115916498..115963018
Genome browser
AA seq
2148 aa
AA seq
DB search
MTSLAQQLQRLALPQTDPSLLSRHEVASLLFDPKEAATIDRDTAFAIGCTGLEELLGIDP
AFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLLHLSPYFLLKPAQKCLEWLIHR
FHIHLYNPDSLIACVLPYHETRVFVRVIQLLKISNPKHKWFWLSPVKQSGVPLARGTLVT
HCYKDLGFMDFICSLVTKSVKAFAEYPGSSAQLRVLLAFYASTIVSALVAAENLSDNVVA
KLFPYIQKGLKSSLPDYRAATYMIICQISVKVTMEDTFVNSLASQLIRTLTKVPSQVKDG
LGCLIILLQRQKPETLGKKPFPHLCGVPDLITLLHGISERYDVSPLLRYMLPHLVASVVR
HVAGEETEGIDGQIYKRHLEAILTKIPLTNNLDHLLASLLFEEYISYSSKEDTRADEVAL
LNEQFLPLIRLLESKYPRTLDVVLEEHLKEITGLKKQELFHQFISLSTSGGKYQFLEDSD
TSLMLSLNHPLAPVRLLAINHLKNIMKTSKEGIDETFIKEAILTRLGDDNVDVILSALSA
FEIFQQHFSVEETISHLLNLFQRAELLKNKGWYRVLELAANILIKEEVLSKSDQLSNQVV
VQLLPFMVITSDDIESPDMKIAIHLSKSGICSLHPLLRGWKEALENVIRSRKSIDIIGVG
NQKMVQLLAGNLSSGDRSSMLRLVEDLISAGEKESYNLKQKVTFHMIMSVLISCCSSFRE
TCFPFAVRVFSLLRKKVKKLKSIMATVEIPPEWHLELMLNKGLPEELWARYVQQLHSAQK
VTMEDSILLIFSLKCFIFTLKAPKSFPTGATWWNPEQLDDDSRYYLHLLIGVFELLLEFS
DAMHFRVLMRLIMKVHLQDVLQVFKFFCVLWTYGSSLSNPLNCTVKSELQTQALYIGSVM
LSSQNTQYKQKLASTASPVVLSLLLSLGSPVKEVRRAAVQCLQALSGVASKFQLVIEHLV
PKAEEITSDATYVVQDLATLFDELQREEKQKSHQKLSETLRSLLHGIYDCPSYIAKDLMK
VFQDLNSETVLAQLLPVVERLLEKVEKEPTAVLKDEAIVLHLTLGKYNEYSAPLLHRDPK
SLDLFLKAVHTTKELHPGMPTVQITALEKITKPFFAALVDGKVQQKLLCVLFDLLVNCKN
SHCVQTVGSVFKGISVDAEQVRIELEPRDKAKSLGTIQQTRRQKMQQKKSQDVESVQEVE
GPYWQRVTLILELLQHKKKLKSPQILIPTLFNLLSRCLEPLSSEQGNMEYTKQLILSCLL
NICQKLSPDGGRIPKDIVDEEKFNVELIVQCIRLSEMPQTHHHALLLLGTVAGIFPDKVL
HNIMSIFTFMGANVMRLDDAYSFQVISKTVKMVIPALIQSDTGDSIEVTRNVEEIVVKII
GVFVDALPHVPEHRRLPILVQLVDTLGAEKFLWILLVLLFEQYVTKTVLVAAYGEKDAIL
EADTEFWISVCCEFSVQHQVQSLMLILQYLEKLPEEKEETNPKTVSSKSEVQDEMLPVFK
VDTHTSKQLRHFKYLSVSFMAQLLASNHFLKKVVESGGPKILHGLEQRLLETVLGYINTV
AQSVEKNADKLTVKFWRALLSKAYDALDKVNALLPTETFIYVIRGLVGNPLPSVRRKALD
LLNNKLQQNTLWKKKMVHRFLKLVPVLLAIVQHKKKEAEDEQAINRQTALYTLKLLCKNF
GAGNREPFIPVLSTAVKLIAPEKKEERNVLGSALLCIAEVTSTLEALAIPQLPSLMPSLL
AAMKSTSELVHSEVCLLSALAALHKVVETLPHFISPYLEGLLIQVIHLEKITSEMGSASQ
ANIRLASLKKTLATMLSPRVLLPAISKTFKQIQKNWKNHMGPFMSILQEHITVMKKEELL
SHQSQLTTFFLDALDFRAQHSEANLEEVGKTEIWIIDCLVAMVVKLSEVTFRPLFFKLYD
WAKTEDAPKDRLLTFYNLANCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDS
EQDPEKCCLLLEFILSCLYKIFLFDTQNFMSKERAEALMMPLVDQLENRLGGEERFQERV
TQHLVPCIAQFSVAMADDSMWKPLNYQILLKTRDSSPKVRFAALITVLAVAEKLRENYIV
LLPESIPFLAELMEGKPKVNKDAKPCGHRLTQICLSPLPVPEAQVRKP
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccttagcccagcagctccagcgactcgcccttcctcaaactgatcccagcctc
ctatctagacatgaagtggcctctctgttgtttgaccccaaggaagcggccaccatcgac
agggacaccgcctttgccatcggatgcactggcctggaggagcttcttggaattgaccct
gcctttgaacagtttgaagcaccgttgttcagccagctagcaaaaaccttggagcgcagc
gttcagaccaaagcagtgaacaaacagctggatgaaaacatttcactgttcctccttcac
ttgtctccgtatttcctgcttaagccagcacagaagtgcctggagtggttgattcacagg
ttccatatccatctttacaatcccgatagtcttattgcttgtgttctgccctaccatgag
acacgggtatttgtgcgggtgatacaacttctaaaaattagcaatccaaaacacaaatgg
ttttggctgtctcctgttaagcagtctggagtgcccttagctagaggaactttggtcacc
cattgctacaaagaccttggattcatggattttatttgcagtttggtgaccaaatctgtg
aaggcgttcgctgagtatccgggaagctcagctcagctcagagtgctcttggccttctat
gcttccaccattgtgtctgctctggtggctgctgagaacctgtcagataatgtagttgcc
aaactatttccatacatccaaaaggggttgaaatcatctttaccagattatagagctgcc
acatacatgataatctgtcagatttctgtgaaagtaacgatggaagatacctttgtgaat
tcactggcatcccagctcatcagaacactgaccaaggttccttctcaggtcaaggatgga
ttaggttgcctgataattctcttacagcgacaaaagccagaaacgctcgggaaaaagccg
tttcctcacttgtgcggcgttccagacctcataacgctgcttcacgggatctccgaacgc
tacgacgtcagtcctcttctgcgctacatgcttccccatctggttgcctctgttgttcgg
catgttgcaggagaagaaacggaaggaattgatggtcaaatctacaagagacacttagaa
gcaatacttacaaaaataccactgacgaacaacttggatcacctgctagctagccttctt
tttgaagaatacatttcctacagttccaaggaggacacccgtgctgatgaagtagctctg
ctgaatgagcagtttcttccactcatcagacttctagaaagcaaataccccagaacatta
gatgttgtattagaggaacacctgaaagaaattacaggccttaaaaagcaggagcttttc
catcagtttatttctctttctacgagcggaggaaagtatcagtttttagaggactctgac
acatctttgatgctcagtttgaatcatccactggctcctgtgagacttctggccattaat
cacctaaagaatatcatgaaaacatcaaaggagggcatcgatgagactttcattaaagaa
gctattctaacccgattaggcgatgataatgtagatgtcattttgtcagcactgagtgct
tttgagattttccagcaacacttcagtgtagaggagaccatttcacatcttctgaatctc
ttccaaagagcagaacttctcaagaataaggggtggtacagggtgctagagctagcagca
aacatactaattaaagaagaggtactgagtaaaagcgatcagttgtcaaatcaggtggtt
gtccagttgttgccttttatggtaattactagtgatgacatagagtctcctgatatgaaa
attgctatacatttgtcaaaatcaggaatttgctctctgcatcctctactaagaggctgg
aaagaagctcttgaaaatgttattagaagcagaaagtcaatagatataattggcgtagga
aatcagaagatggtccagttgctggctggcaatttaagctcaggagaccgctcttcgatg
ctgaggctggtggaagatttaataagtgctggggaaaaggagtcctacaacctgaagcag
aaagtgacatttcacatgatcatgtctgtgcttatttcttgctgctcgtccttcagagaa
acctgctttccgtttgctgttcgggtgttcagtttattgcggaagaaagtaaagaagctc
aaaagcatcatggctactgtggaaatcccccccgagtggcacctggaactgatgctgaac
aaaggattgccagaagagctgtgggcgcgctatgtccagcagctccacagtgctcagaag
gttactatggaggactccatcttactgatattttccctgaagtgttttatttttaccctg
aaggctcccaaatcttttcctacaggtgctacatggtggaatcctgagcagctagacgac
gacagcagatactacctgcacttgctcattggtgtctttgaactgctgcttgagttttct
gacgccatgcatttcagggttctgatgaggcttatcatgaaggtacacttacaagatgtt
cttcaggtgttcaagttcttttgtgttttgtggacctatggttctagcctctcaaatcca
cttaactgcactgtgaagtcagagctgcagactcaggctctttacataggctctgtgatg
ctttcttctcagaatacacagtataagcaaaagctggcatctactgcatctccagtggtg
ctgtctctgctcctcagtctgggaagccctgtaaaagaagtgcgcagagctgccgttcag
tgtctccaggccctcagcggagtagcctcgaagtttcagctggtgatagagcacctggtt
cctaaggcggaggagatcacttcagatgctacctatgtggtccaggatttggctacgtta
tttgatgaactacagagagaggagaaacagaaatcacatcagaagttgtctgagaccctg
agaagccttcttcacggcatttatgactgcccgtcatacattgcaaaggacttgatgaaa
gtgtttcaagacctgaacagtgagacggtgctggcccagctgttgcctgtagtggagcga
ctcctagagaaggtggagaaggagcccacagctgtcctgaaagatgaggccattgttttg
catctcactctgggaaaatacaatgagtattcagctccacttttacatagagacccaaag
agtctagacctgtttctaaaggctgtgcacacaacaaaggagcttcacccaggaatgcca
accgttcagattactgctcttgaaaagattacaaagccattctttgcagctctagtagat
gggaaggtgcagcagaagcttctgtgtgtgctgtttgacttactggtgaactgtaaaaac
tcccattgtgttcagacggttggcagtgttttcaaagggatttctgttgatgctgaacaa
gtcagaatagaactggagccgcgagataaagccaaatctttgggcacaattcagcaaaca
agaaggcagaaaatgcagcagaaaaaatcacaagatgtagaatctgtccaagaagttgag
ggcccttactggcagagagtcaccctcatcctggagttactgcagcacaaaaagaagctc
aaaagccctcagatactgattccaactctctttaacttgctgtcaaggtgtttagaacct
ttgtcatctgaacagggaaacatggaatacactaaacaattaattctgagttgtttgctc
aacatctgccaaaaactctccccagacggtggcagaatacctaaagacattgtagatgag
gagaagttcaatgtagagttgatagtgcagtgtatccgcctctcggagatgccgcagact
caccaccatgcccttctgctcctgggtactgttgctgggatatttccggataaagttctt
cataatatcatgtctatttttacattcatgggagccaatgtcatgcgcctagatgatgct
tatagttttcaagttattagcaagacagtgaaaatggtcattccagcgcttattcagtct
gatactggggattctatagaagtcactagaaatgttgaagagattgtggtgaaaatcatc
ggtgtgtttgtggatgctcttccacacgtgccagagcacaggcgcctgcccattcttgtt
cagcttgtcgacacgctaggcgcagaaaaattcctgtggattctccttgtcctgcttttt
gaacagtatgtcaccaaaacagtgctggtggctgcctacggagaaaaggatgctatttta
gaggcagatactgagttctggatttccgtctgttgtgaattcagtgtccagcatcaggtc
cagagcttgatgcttatcctccagtatctggaaaagctgccagaggaaaaagaagaaacc
aaccccaagacagtgtctagtaagagtgaagtacaagatgaaatgctgccagtctttaag
gtggacacgcacacaagcaagcaacttcggcattttaaatatttgtcagtgtccttcatg
gcccagctcctggcttctaatcatttccttaaaaaggtggttgaaagtggcggtcctaag
atcctacacggcctggagcagaggttgctggaaacagtcctcggctacattaacacagta
gctcagtccgtggaaaagaatgcagacaaactgaccgtgaagttttggagagccctgctc
agcaaagcctacgacgcgctggataaggtcaatgccttgttgcctacagaaacattcatc
tatgtcatcagagggctggtgggcaaccccctgccatctgttcgtaggaaagctctggat
cttttgaataacaagctacagcagaacacattatggaagaagaaaatggttcaccgcttt
ctaaagctggttccagtccttctagccattgtgcagcataagaaaaaggaggcagaagac
gagcaggcgattaacagacagacagcgctctacaccctaaagctcctgtgcaagaacttt
ggagcggggaaccgagagcctttcatacccgttctgagcacggcagtaaagctgatagca
ccagagaaaaaggaggagagaaacgtcctgggaagtgccctgctgtgcatagcagaagtg
acctccactttggaagcactggccatccctcagcttcccagtctgatgccatcgctgttg
gcagccatgaagagcaccagtgagttggtccacagtgaagtctgcctgctcagcgccctg
gctgccctgcacaaagttgttgaaaccctcccacacttcatcagcccctacctggaagga
cttctgatccaggtgattcacctagagaaaatcaccagtgaaatgggttctgcctcccag
gctaacatccgcctggcatctcttaagaagaccctcgccactatgctctcgcctcgagtc
ctgctgccagccattagcaagacgttcaagcagatccagaagaactggaagaatcacatg
ggcccgtttatgagcatcttgcaagagcacatcacggtgatgaagaaggaagagctcttg
tctcaccaatctcagctgaccaccttcttcctggacgccctggacttccgggcacagcac
tcagaggctaatctagaggaagttgggaaaacggaaatttggatcattgactgtctagtg
gccatggtggtgaagctctctgaggtcacattcaggcctctcttcttcaagctgtatgat
tgggccaagacagaagacgccccaaaggacagactactgacattctacaatctggccaac
tgcattgctgagaaattgaaaggccttttcactctgtttgctggccacttggtgaaacct
tttgcagacaccttgaaccaagtaaacatctccaaaacagatgaagcgttttttgactct
gaacaggaccctgaaaagtgctgcctgttgttggagttcatcttgagctgcttgtacaag
atcttcctttttgacacccagaatttcatgagtaaagagagagcagaagccttaatgatg
ccgctggtggatcagctggaaaacaggcttggaggagaagagcggttccaagagcgggtg
acacagcacctcgtgccctgcatcgcacagttttctgtggccatggcagacgactccatg
tggaaacccctcaactaccagattctgctcaagacaagagactcctcccctaaggtgcgg
tttgcagccttgattactgtcttagcagtggctgaaaagctgagagagaattatattgtt
ctgcttccagagtcgattccttttctagcagaattgatggaaggtaagcctaaagttaat
aaagatgcaaagccctgtggccacaggctgacacagatttgtctgagtcctctacccgtg
cctgaggcacaagtcaggaagccgtga
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integrated database retrieval system
