Arvicola amphibius (Eurasian water vole): 119816135
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Entry
119816135 CDS
T08327
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
aamp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119816135 (Ube4b)
04120 Ubiquitin mediated proteolysis
119816135 (Ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119816135 (Ube4b)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119816135 (Ube4b)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
U-box type E3
119816135 (Ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
119816135
NCBI-ProteinID:
XP_038188391
LinkDB
All DBs
Position
6:6899398..7013598
Genome browser
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLTSPQRENPPGPPIPASAPGPSQSLGLNVHSM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSEKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPISTAARSPD
RNLMLNTGSNPGTSPMFCSLGSFSASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY
LIECFDRVGIEEKKAPKMCSEPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV
PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPVLQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPVCSLVASLPLWLPKSLSPGSGRELQRLSYLGPFFSFSVFAEDDAKVVE
KYFSGPTITLENTRVVSQSLQHYLELGRQELFKILHSVLLNGETREAALSYMAAIVNANM
KKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPKCRINLPNDETRINA
TMEDVNEWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKSNESQWKDSPLAPRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLMLRILDPAYPDVTLPLSSDVPKAFAALPEFYIEDVAEFLFFIVQYSPQVLYEPCTE
DIVMFLVVMLCNQHYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLSQDERVSRSYLAL
ATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFRLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQMLTENMLEPVPELKEQIQAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgccggaggcgcctggcacgacttgctggtgga
cagacctcccaaccaagcaccccgcttacgtctccccagagggagaaccctccaggacct
ccaatacctgcatcagccccaggcccttcccagagtcttggtctcaatgtccacagcatg
accccagctacctcccccataggtgcagcaggagttgcccatcggagtcagagcagcgaa
ggagtcagctctctgagcagctcaccgtccaacagccttgagacgcagtctcagtccctc
tcccgttcccagagcatggatatcgacggcgtctcctgtgagaaaagcatgtcccaggtg
gatgtggattcgggaattgaaaacatggaagtggacgagaacgaccgacgggagaaaagg
agcctgagcgaaaaggagccttcttcaggtcctgaagtgtccgaagagcaggccttacag
ctggtctgtaagatcttccgcgtctcctggaaggaccgggacagagatgtcatcttcctt
tcttctctttctgcgcagtttaaacagaacccaaaagaagtgttctctgattttaaggat
ctgattggccagattttaatggaagtgctgatgatgtccactcagacacgagatgaaaat
ccgtttgccagtctgacagccacatcccagcctatttccacggcagctcggtcacctgac
agaaatcttatgctgaacactggctccaatccaggaacaagccccatgttctgcagcctg
ggctccttcagtgccagctcgttgtctagtttgggagcctctggtggagcaagtaactgg
gattcatacagtgatcatttcaccattgaaacctgcaaggagacagacatgctgaactac
ctcatcgagtgttttgaccgagttggaatagaggagaaaaaagcaccaaagatgtgcagc
gagccagcagtcagccagcttctgagcaacatccgctcgcagtgcatctcccacaccgcg
ctagtgctacaaggttccctcacacagcccaggtccttgcagcagccgtccttcctcgtg
ccgtacatgctgtgcaggaacctcccatatggctttattcaggagctggtgaggaccact
catcaggatgaagaggtgttcaagcagatctttatccctgttttacaaggcctggctctg
gctgccaaggagtgctctctcgacagtgactacttcaaatatcccctcatggcactaggt
gaactctgtgaaaccaagtttgggaagacacaccctgtgtgcagtttggtcgcctctttg
cctctgtggttgccgaagtccttaagccctggttctgggcgggagctgcagagactctcc
tacttagggcccttctttagcttctcggtcttcgcggaggacgatgcaaaagtggttgag
aaatacttctcggggcccaccattaccctggagaacacccgtgtagtcagccagtcacta
cagcattacctggagctgggacggcaagagcttttcaagattctgcatagtgtgttgtta
aatggcgaaactcgtgaagcagctctcagttacatggcggccatcgtcaatgccaatatg
aagaaagcccagatgcaggcagatgatcggttggtgtccaccgatggctttatgctgaat
ctcctttgggtcctgcagcagctaagtacaaagatcaagttagaaacagttgaccccact
tacatattccacccaaaatgtcggattaatctcccaaacgatgagacacggataaatgca
acgatggaggatgtgaatgagtggctggctgagctctatggagatcagcctccattttct
gagccaaaattccctacggaatgtttctttctcaccctgcacgctcaccacctctctatt
ctgcctagttgtcgtcgctacatccgcagactacgagccatccgagagctcaacagaact
gtggaagatttgaaaagtaacgaaagccagtggaaagattccccactggcccccagacac
cgagaaatgctgaagcgctgtaaaactcagcttaagaaactggtacggtgcaaggcctgt
gctgacgctggcttacttgacgagagcttcctgagaagatgtctgaatttttatggcctt
ctcattcagctgatgctgcgcatcctggaccctgcgtatcccgacgtaacactgccttta
agttcagatgtccccaaggcgtttgcagcattgcctgagttttatatagaagatgttgct
gaatttttattttttattgtacaatactcgccccaggtgctgtatgagccctgcactgag
gacattgtgatgttccttgtcgtcatgctgtgcaaccagcactacatccgcaacccatac
ctagtggccaagctggtggaggtcatgtttatgaccaacccctctgtccagcctcgaact
cagaagttttttgagatgattgagaaccatcctctctctaccaaattgctggtaccttcc
ctcatgaaattttatacagatgtcgagcataccggagccaccagtgagttctatgacaag
ttcacgattcgctatcacattagcactatttttaagagcctttggcaaaacatagctcat
catggcaccttcatggaggagttcaattctggaaagcagttcgttcgctacatcaatatg
ctgataaatgacacgacctttctgctggacgagagtctggagtcgctgaagcggatccat
gaagtgcaagaggagatgaagaacaaagagcagtgggaccagttgcctcgggatcagcag
caggcccggcagtctcagctttctcaggatgagcgcgtttcacgttcttatcttgcactg
gcgactgaaaccgtggacatgttccatctcctcaccaagcaagtccagaagccgttcctc
agaccagaacttggaccccgattagcagccatgctgaactttaacctccagcagctgtgt
ggccccaagtgccgggacctgaaagttgaaaacccagagaagtacggttttgagccaaag
aagctgttggaccaactgacggatatttacttgcagctggactgtgctcgctttgctaaa
gccattgctgatgaccagcgatcctacagcaaggagctgtttgaagaagtcatttcaaag
atgcggaaggcaggaatcaaatccaccattgcaatagagaagtttaggcttcttgctgag
aaggtggaggaaatagtggccaagaatgcacgggcagaaattgactacagcgacgcgcca
gatgagttcagagaccctctgatggacaccctgatgaccgaccctgtgagactgccctct
ggcaccataatggaccgctccatcatcctgcggcatcttctgaactcccccactgacccc
ttcaaccgccagatgctgactgagaacatgctggaaccagtgccagagctgaaggagcag
attcaagcctggatgagagagaagcagagcagtgaccactaa
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