Arvicola amphibius (Eurasian water vole): 119816190
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Entry
119816190 CDS
T08327
Symbol
Prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00310
Lysine degradation
aamp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119816190 (Prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119816190 (Prdm2)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119816190 (Prdm2)
Enzymes [BR:
aamp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
119816190 (Prdm2)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119816190 (Prdm2)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119816190 (Prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2H2_11
AAT
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
119816190
NCBI-ProteinID:
XP_038188480
LinkDB
All DBs
Position
6:9597105..9700240
Genome browser
AA seq
1787 aa
AA seq
DB search
MYQNTESVAATETLAEVPEHVLRGLPEEVRLLPSAVDKTRIGVWATKPILKGKKFGPFVG
DKKKRSQVRNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRA
IYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRRGKKKSQENKNK
GIKTQASQLKASEPDSTFANMRGSAEGPKEEDERLLASAPEQPALLPEVINQDAVPQVTT
PLPTCEPQPEPEGKQEVTDCEINDLEEEEEEEEDEEEELEEEEEELEEDGEEEAGIPNES
SVKEPEIRCEEKPEDLLEEPQSISNETSEDSPDTAPVPHIPRTREEANGDVFETFMFPCQ
HCERKFATKQGLERHMHIHMSTINHAFKCKYCGKAFGTQINRRRHERRHEAGLKRRPSMT
LQPSEDLDDGKGDNVTSKNESSSPQLGQDSLILNSEKTSQEIVNSSSVEENGEVKELHPC
KYCKKVFGTHTNMRRHQRRVHERHMIPKGVRRKGGLLEEPHPPAEQAPPSQNVYVPSTEP
EEEGDADDVYIMDISSNISENLNYYIDGKIQTNSSTSNCDVIEMESNSAHLYGIDCLLAP
VTVEITQNIKSTQVSVNDELPKESPSSTNCESKKRRTASPPVLPKIKAEADSDSTAPSCS
LSLPLSISTTEVVSFHKEKGVYLSSKLKQLLQTQDKLTPPAGISAAEIPKLGPVCVSAPA
SMLPVTSSRFKRRTSSPPSSPQHSPALRDFGGKPSDGKAAWTDTSLTSKKPKLESRSDSP
AWSLSGRDERDTGSPPCFDEYKLTKEWAASSPFSSVCNQQPLDLSSGVKQKSEGTGKTPV
PWESVLDLSVHKKPCDAEGKEFKENHSAQPACGAAKKKKPTTCMLQKVLLNEYNGVSLPT
ETTPEVTRSPSPCKSLDTQPDPELGPDSSCSAPTVESPPEVDGPSSPSLQTASISSSQLP
PLLIPTEPSSPPPCPPVLTVATPPPPLLPNVPLPTPSSDASPQQCPSPFSNTTAQSPLPI
LSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSTSSSSSSSSFSSSSCSSTSPSPPPLSAV
SSVVSSGDNLEALLPAITFKQEESESEGLKPKEEAPPTGGPSVVHETFSKSFVCNVCESP
FLSIKDLTKHLSVHAEEWPFKCEFCVQLFKAKTDLSEHRLLLHGVENIFVCSVCKKEFAF
LCNLQQHQRDLHPDEECTHHEFESGTLRPQNFTDPSKARVEHMQNLSEEPLETSREEELN
DSSEELYTTIKIMASGVKTKDPDIRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTH
NIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVHPKNGV
VVLDNSGKNAFRRMGQPKRLSFNVELSKMSPNKLKLSALKKKNQLVQKAILQKNRSAKQK
TDPKDTSEVSSHICPYCDREFTYIGSLNKHAAFSCPKKPLSPSKRKVSHSSKKGSHASPA
SSDRNNSSSTRRRTADTEIKMQSTQAPLGKTRARSSGPAQASLPSSSFRSRQNVKFAASV
KSKKASSSSLRNSSPIRMAKVTNVEGKKSKAVAKSHSAQLSSKSSRNLHLKVQKSKAVLQ
SKTALASKKRTDRFVVKSRERSGGPITRSLQLAAAADLSESRREDSSARHELKDLSFQCA
ESKEWTVADLHGAPPALLLISMMSVALTGAGTSGTLPNRSVAKKPWRPCPSATVSAWHPD
APPQQPRTSPDNAERSRPQQQLSSRDPSSKSRHFVCSMTAPEVTWNQ
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagaatacggagtctgtggccgccactgagactctggctgaggtacctgaacac
gtgctgcgaggacttccagaggaagtgaggcttttaccatctgctgttgacaagacccga
atcggtgtctgggccactaaaccaattttaaaagggaaaaagtttgggccatttgttggt
gataagaagaaacgatctcaagttaggaataatgtgtacatgtgggaggtgtactaccca
aatctggggtggatgtgcattgatgccactgatccggagaagggaaactggttgcgctat
gtgaactgggcttgctcaggtgaagagcagaatttatttccactggaaatcaacagagcc
atttactataaaaccttaaagccaatcgcgcctggcgaagagctcctggtctggtacaat
ggggaagacaaccccgagatagcagctgcgattgaggaagagcgagccagcgcccggagc
aagcggagctctcctaagagccgcagagggaagaagaaatcccaggagaacaaaaacaaa
ggcatcaaaacccaggcctcgcagctgaaggcgagtgagccagactccacctttgcaaac
atgagagggtctgcagaaggtccaaaggaagaggatgagaggcttttggcttctgcacct
gagcagccagcccttcttcccgaggtgatcaaccaggatgcagttccacaggtgaccacc
cctctccccacctgtgaaccacagccagagccagagggaaaacaagaagtcacagattgt
gagatcaatgatctggaggaagaggaagaagaggaggaggatgaggaggaggaattggaa
gaggaagaagaggagttggaagaagatggggaagaagaagctggcatacccaatgaaagc
tctgtaaaagagccagaaatacggtgtgaagaaaagccagaggatttattagaagaacca
cagagcatctcaaatgagacttctgaagactctccagacacggcccctgttcctcacatc
cccagaactagagaggaggccaacggtgatgtgtttgaaacgtttatgtttccatgtcag
cattgtgaacgaaagtttgcaaccaagcaggggcttgagcggcacatgcacatccacatg
tctacaatcaatcatgctttcaagtgcaagtactgtgggaaagcgttcggtacacagatt
aacaggaggcggcatgaacgtcgccatgaagcggggttaaagaggagacccagcatgaca
ctacagccctcagaggacctagatgatggcaagggagataatgtcacttctaaaaatgag
tcaagttcacctcaacttggacaagactctctgatactgaactcagaaaaaacttcccag
gaaatagtaaattcatctagtgtggaagagaatggcgaagttaaagaacttcatccatgc
aaatactgcaagaaggtatttggaactcacaccaatatgagacgacatcagcgcagagtt
catgaacgccacatgattcccaaaggcgtccgtcgaaaaggaggactcctggaggagcct
cacccaccagcagagcaggcaccaccttcccagaacgtttatgtaccaagcacagagccg
gaggaggaaggagatgctgatgatgtttacatcatggacatttcaagcaacatctctgaa
aacctaaattactatattgatggtaagattcagaccaacagcagcactagtaattgtgat
gtgattgagatggagtctaattctgctcacttgtatggcatagattgtctgcttgctcca
gtaacagtagaaattactcaaaatataaagagtacccaggtctctgtaaacgatgaactt
cctaaagagtctcccagtagcacaaattgtgaatcaaagaaacggagaactgccagtcca
cctgtgctccccaaaattaaagctgaggcagattctgactccacagcgccctcatgttcc
ttaagtttgcctctgagcatatcaacaacagaggtggtgtctttccataaagagaagggt
gtctatttgtcttcaaagctcaaacagcttcttcagacccaggacaaactgactcctcct
gcagggatttcagcagctgagatccctaagttgggtcctgtgtgtgtatctgctcctgca
tccatgttacctgtgacctctagtcgatttaagaggcgcaccagctctccacccagttct
ccacagcacagtcctgcccttcgagactttggtgggaaaccaagtgatgggaaagcagca
tggacagacacaagtctgacttccaagaaacccaaattagaaagtcgtagtgactcacca
gcctggagcttgtctgggagagatgagagagacactggaagccctccttgctttgatgaa
tacaaactaacaaaagaatgggcagccagttctccttttagcagtgtgtgcaaccaacag
ccattggatttatccagtggagtcaaacagaagtcagagggtacaggcaagactccagtc
ccgtgggaatctgtgttggatctcagtgtgcataaaaagccttgtgatgctgaaggcaag
gaattcaaagagaaccattcagcacagccagcatgtggtgctgcaaagaagaagaaacca
accacctgcatgttgcaaaaggttcttctcaatgaatataatggtgttagcttacctaca
gaaaccacaccagaggtgaccaggagcccaagtccttgtaaatccctagatacacagcca
gatcctgaacttggtcctgactcgagttgctcagcccctactgttgagtccccacctgaa
gttgatggcccttcatcaccctctcttcagacagcctccatatcttcgagtcagctgcct
cctctcttgatccccacagagccttcttccccgcccccctgccctcctgtgttaacagtt
gccactccaccacctcccctccttccaaatgttcccctccccactccctcttctgatgca
tcgcctcagcagtgcccctctccattctccaacaccactgcccagtctccccttccaatt
ctttccccaacagtgtccccttcaccctctcccattcctcctgtggagccactcatgtct
gctgcttcccctggtcctccaacactttcttcctccacttcctcctcctcctcttcctct
tccttctcttcctcttcatgctcctccacatccccctccccaccccctctctcggcagtg
tcgtctgtggtgtcctctggggacaacctggaagcacttctccctgcaataacttttaaa
caggaggagtcggagagtgaaggtctgaaacccaaggaagaggccccgcccacaggtggg
ccgagtgttgtccacgaaacattcagcaaaagctttgtttgcaatgtctgtgaatcacct
tttctttccattaaagatctaaccaagcatttatctgttcatgctgaagaatggcccttc
aaatgtgagttttgcgtgcagctttttaaggcgaagactgacctgtcagagcataggctt
ctgcttcacggagttgagaatatcttcgtgtgttccgtatgtaagaaagaatttgccttc
ttatgcaatttacagcagcaccaacgagatctccacccagatgaggagtgcacacatcac
gagtttgaaagtgggaccctgagaccccagaacttcacagaccccagcaaggcccgtgtg
gagcatatgcagaatttgtcagaagagcctttggaaacttccagagaggaggagttaaat
gattcctctgaagagctttacacaaccatcaaaataatggcttctggagtaaagacgaaa
gatccagacattcgacttggtctcaatcagcactacccaagctttaaaccacctccattt
cagtaccaccatcgaaaccccatggggattggcgtaacggccacaaacttcaccacccac
aatattccacagacattcactactgccattcgctgtacaaagtgtggaaagggggttgat
aatatgcctgagctgcataaacatatcctggcatgtgcatctgcaagtgacaagaagagg
tacactcctaagaaaaacccagtgcccctgaaacaaactgtgcatcccaaaaatggagtg
gtggttttagacaactctgggaaaaatgccttcagacggatggggcagcccaagagactg
agcttcaatgttgaactcagcaaaatgtctccaaataagctcaagctaagtgcactgaag
aaaaaaaaccagctagtacagaaagcgatccttcagaagaacagatctgcaaagcagaag
acagacccaaaggacacttcggaggtatcctctcatatctgcccttactgtgacagggag
ttcacgtacatcggcagcctgaataagcatgctgctttcagctgtcctaaaaaacccctc
tctccttccaaaagaaaagtttcccattcgtctaagaaaggtagccatgcatcacctgcc
agcagtgacagaaacaacagcagcagtacccggagacggaccgcagacacggagattaag
atgcagagcacacaggcaccgttgggcaagaccagagctcggagctcaggccctgcccaa
gcctcactgccctcctcatccttcagatccagacagaatgtcaagtttgcagcttcagtc
aaatccaaaaaagcaagctcttcatccttgaggaactccagtcctataagaatggccaaa
gttactaatgttgagggcaaaaaatccaaagctgttgccaagagtcattctgctcagctc
tcaagcaaatcctcccgaaacctgcacttgaaagtgcagaagagcaaagctgttctacaa
agcaagactgctttggccagtaagaaaagaacagaccggttcgtagtaaagtctagagag
cggagtgggggcccaatcaccagaagccttcagctggcagctgctgcggacctgagtgaa
agcaggagagaggacagcagtgccaggcatgagctgaaggacttgagtttccagtgtgca
gaaagcaaggagtggactgttgcagacctgcatggtgccccacccgcactgctcctgatc
tccatgatgtccgtggctctgacaggtgctggaacctcaggcacattaccaaatagaagc
gttgccaagaagccatggcgtccatgtccatctgctacagtctccgcctggcatcccgat
gcacctcctcagcagccccgtacatcaccagacaatgcagaaaggtcaagacctcagcag
caactcagttccagggacccttcttcaaagagtaggcactttgtctgctccatgacagca
cctgaagtgacctggaatcagtga
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