Arvicola amphibius (Eurasian water vole): 119816234
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Entry
119816234 CDS
T08327
Symbol
Uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119816234 (Uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119816234 (Uimc1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
119816234 (Uimc1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
119816234
NCBI-ProteinID:
XP_038188619
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All DBs
Position
6:complement(151262155..151339404)
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AA seq
727 aa
AA seq
DB search
MPRRKKKIKEASESHNSEKKDQETTSPVSIKKKRKLEDLLIVISDSDGEEAKEENGLQKM
KTKQSNRSKCLAKRKIAQMSEEEQFALALRMSEQEAREVNSQEEKEEELLRKAIAESLNS
CWSSDASATSSQPLAIGSSSHSHQENTKDSGTTEGISQLVPPSLFKDSNISQGNEAEERK
EPWDHNENTEEEPVSGSSGSWDQSSQPVFENESVKCLDRCTGHLVEHTKCGKPQESTGSG
YAFLKAVQGKGDTSRQCLPTPTDTKSLQDNGGTVHYYWGIPFCPAGVDPNEYTNVILCQL
EVYQKSLKMAQRQLFKKRGFGEPVLPRPPFLTQNECGQEDERSENNEGVSEDTGEEAREE
RQGSGASVWNSETKDFQKSSIKSLKQKLLLEEEPTTSHGQSSQGLFVEETSEEVLKSSEE
GNCVPVSQSIAALANKRSLVLMPESSAEEITVCPETQLSSPEPFDLNREDSPDSSEVPIE
VRRTVSDKQVGNRENGEKAIPIPAFSSGTRVSCPLCDQDFPPTKIEQHAMYCNGLMEQET
VLTRKRREARNKSHSKTSTRTALDINKKEKCYLCKSLVPLGEYECHVEACLQLAKGDRGD
GTEVGKRTRVCAAVEGKQEQRLRKAKDKDHSQGRLLSLLEQSEHKTTGVEKKNTSSEART
FKIPSPEVEEASCSREMQSSLSQLNLNESPIKSFVPVSEATNCLVDFKDQFTFRSRTKSG
RRRRRKS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaagaaagaaaaaaattaaagaagcctctgaaagccataactcagagaagaag
gatcaagaaaccaccagtcccgtcagtataaaaaagaagcgtaaacttgaggacttactc
atagtgatatctgatagtgatggagaggaagcaaaagaggagaatggattgcagaaaatg
aagacaaaacagtctaacagatcaaagtgtttggctaaaagaaaaattgcacaaatgtca
gaagaagaacaatttgctttggctcttagaatgagtgagcaggaagctagggaggtgaac
agccaggaggagaaagaagaggagctcttgaggaaagccattgctgaaagcctgaatagt
tgctggtcttctgatgcttctgctaccagttctcaacctttggctattggatcatcttca
cattcccatcaagagaacaccaaagattctggaaccactgaaggcatatcgcagctggta
cctccatcactgtttaaagactcaaatatcagtcagggaaacgaggctgaggaaagaaaa
gagccctgggaccacaatgaaaacactgaagaggagccggtctctggcagctcaggaagc
tgggaccagtcaagccagccagtgtttgagaatgagagtgttaaatgtttggacagatgt
actggccacttggttgagcacacaaagtgtgggaagccacaggaaagtactgggagtggt
tatgcttttctcaaagctgtccagggtaagggggacacatctaggcaatgtcttcctacc
ccaacagacaccaaaagtctccaggacaatgggggcactgtgcactactactggggtatt
ccattctgccctgctggagtagatcctaacgaatataccaatgtcattctctgtcagttg
gaggtttatcagaagagcctgaaaatggctcagaggcagctttttaaaaaaagagggttt
ggggaaccagtgttacctagacctccttttctgacccagaatgaatgtggccaagaagat
gagaggagtgaaaacaatgaaggcgtctcagaagacacgggagaggaagccagagaggaa
aggcagggatctggggcatctgtctggaactcagagaccaaggattttcaaaaaagttca
attaaaagcttgaaacagaaacttttgttggaggaagaaccaacaaccagtcatggtcag
tcttcccaaggtctatttgttgaagagacttcagaagaagttctgaagagttctgaagaa
ggaaactgtgtgcctgtctcacaaagcattgcagctttggccaataagagaagcttagtc
cttatgccagagagttctgcagaagaaattactgtttgtcctgagacacagttaagttcc
cctgagccctttgacctcaatagagaagactctccagatagcagcgaggtccccattgaa
gtaagaaggacagtgagtgataagcaggttggtaatagagaaaatggtgagaaagcaatt
cccattcctgcattctcgtctggtacccgggtgtcctgtccactgtgtgaccaagacttt
cctcctacaaagattgaacaacacgccatgtactgcaatggtctgatggagcaggaaaca
gtgttaactcggaaacgaagagaggccaggaacaaaagtcacagtaagacatctacacgg
actgccctggacatcaacaagaaggagaagtgttatctctgtaagtccctggtcccactt
ggagagtatgagtgtcatgtagaggcctgtctccagcttgcaaagggagacagaggagat
ggaactgaagtgggtaagagaaccagagtgtgtgcagctgtggaaggcaaacaggagcaa
cggctgaggaaggcaaaggacaaagaccacagtcaaggccgactgctcagtctcttggaa
cagtctgagcacaagaccacaggtgtagagaaaaaaaacacgtcttcagaagcaagaacc
ttcaagataccttcaccagaggtggaagaggctagctgcagcagagagatgcagagttcc
ctctcacagctcaacttaaatgagtctcccatcaagtcttttgttcctgtttcagaagcc
acaaattgcttagtggactttaaagaccaatttacttttcggtcacggaccaaatcaggc
agaagaaggaggagaaaatcttga
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