Arvicola amphibius (Eurasian water vole): 119816360
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Entry
119816360 CDS
T08327
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119816360 (Srrm1)
03015 mRNA surveillance pathway
119816360 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119816360 (Srrm1)
03041 Spliceosome [BR:
aamp03041
]
119816360 (Srrm1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119816360 (Srrm1)
Spliceosome [BR:
aamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
119816360 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
119816360
NCBI-ProteinID:
XP_038188857
LinkDB
All DBs
Position
6:17302765..17335500
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AA seq
921 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRPSPVRRERKRSHSRSPRHRTRSRSPSPAPEKKERSPELPEPSVRTKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRSRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSSKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGSKMAAADSVQQR
RQYRRQNQQSSSDSGSSSTSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRPKETSP
RMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTP
SPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPK
QRSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQANKRHSPSPRPRAPQTSSPPPVRRG
ASTSPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKK
PPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDK
KHKKHKKHKKEKTVAAATTAPAAPAAVSAATTTSAQEEPVPAPEPRKETESEAEDNLDDL
ERHLREKALRSMRKAQVSPQS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagagcaggataatcgattcagcaacaag
cagaagaaactcctcaagcaactgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaatgggaaaaatgctcgtgaa
ttcatgggagaactgtggcccctgctgttgagtgcacaagagaacatcgctgggatcccc
tctgctttcttagagttgaagaaggaagaaataaaacagagacaaattgaacaagaaaaa
ttggcttctctgaaaaaacaagatgaagataaagataagagggataaggaagaaaaggaa
agtagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacggccttcccctgtcaggagagagagaaagcgcagccactctcggtct
ccccggcacagaaccaggagccggagcccttcccctgccccagaaaagaaggagcgatct
ccagagctcccagagccatcagtgagaacgaaagactcttcagtacaggaggccacatct
acaagtgacatcctgaaagctcccaagcctgagcctgtaccagagcccaaagaaccttct
ccagaaaaaaattccaaaaaggaaaaagaaaagacccgaccaaggtctcgatcacgttcc
aagtcacgatctcggagccgttctcgatcaccttctcatactagaccaagacgacgacat
cgatctcgatccagatcgtactctcctagaaggcggccaagcccaagaaggcgaccatct
cctcgaagaagaactccaccaagacggatgcctcctcccccaaggcacaggaggagcagg
tctccagggagacggaggaggcgttcttccgcatcgttgtctggaagtagctcttcgtcc
tcttcatctcgttcccggtcaccgccaaagaagcctcccaagaggacatctagcccccct
cggaaaactcgtaggctatctccttcagcaagtcctccaaggcgaaggcacaggccatcg
tctccagcaactccaccacccaaaactcgccattctccaaccccccagcagtcaaaccgc
acaagaaaaagtcgtgtctctgtgtctccaggaagaacttcgagtaaagtgacaaaacat
aaaggtactgagaaaagagagtcaccgtcaccagcacctaagccgagaaaagtggagctg
tctgagtctgaagaagacaaaggcagcaagatggctgcagccgattctgtgcagcagagg
cgccagtacagaagacagaaccagcagtcatcgtctgactctggctcctcttccacctca
gaagatgagcggcccaagagatcccacgtgaagaatggtgaggtaggcaggcggcggaga
cattccccttctcggagtgcctctccatcacctcggaagcgcccaaaggagacttctcct
cggatgcagatgggaaaacgatggcaatcgccagtgactaaaagtggtagaaggaggaga
agtccctccccaccaccagccagaaggcgaagatctccttcaccagctcctcctcctcct
cctccccctcctcctcggcggcgcagatctcccaccccaccaccacgacgaaggactcct
tctcctcctccacgccgccgctcgccttctccaagaagatactctcctcccattcagaga
agatactctccttccccacctccaaaaaggagaaccgcctcacctccgcccccacccaag
cgaagggcatcaccatctccaccaccaaagcgccgcgtctcccactctccgcctcccaaa
caaagaagccccccagtcaccaagagacgctcaccctccttatcttcaaagcataggaaa
gggtcttccccaggccgttccacccgggaggcccggtcaccacaggcaaacaaacggcat
tcgccctcaccacgtcctcgagctcctcagacctcaagtcctccccctgttcgaagagga
gcatccacatcaccccaaggaaggcagtccccatctccaagtactaggcctattaggaga
gtctccaggactccggagcctaaaaagattaaaaaggcagcctcaccaagccctcagtct
gtaagaagagtttcctcttcccgatctgtctctggatctcctgagccagcagctaaaaag
cctccagcacctccatctcctgtccagtctcagtcaccctccacaaactggtctcctgca
gtaccagtcaaaaaggctaaaagcccaactccaagcccgtcccctgccaggaattctgat
caagaaggaggtggaaagaagaaaaagaagaagaaggacaagaaacacaaaaaggataag
aaacacaagaagcacaaaaaacacaagaaggagaagactgtggctgcagccaccacagct
cctgcagcccctgcagctgtttctgctgccacaaccacgtcagcacaggaagagcctgtg
ccagcaccagagcccaggaaggagactgaaagtgaagctgaggacaaccttgatgaccta
gaaaggcacctgcgggagaaagccctgcggtccatgcggaaggctcaagtgtccccacag
tcctag
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