Arvicola amphibius (Eurasian water vole): 119816404
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Entry
119816404 CDS
T08327
Symbol
Nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1 isoform X1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119816404 (Nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119816404 (Nhlrc1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119816404 (Nhlrc1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119816404 (Nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
Baculo_IE-1
zf-C3HC4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119816404
NCBI-ProteinID:
XP_038188945
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All DBs
Position
6:complement(144508479..144510838)
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AA seq
406 aa
AA seq
DB search
MGEEEAGVRPELVREAEVSLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAHPRS
LAFECPFCRRACRACDTSDCLPVLHLLELLGSTLRASPAALNAAPCAPGVLTCHHAFGGW
GTLVNPTGLALCPKTGRVVVVHDGKRRVKIFDSGGGGAHQFGEKGDAAHDVKYPQDVAVT
NDFHVVVTDAGDRSLKVFDFFGQIKLVVGKQFSLPWGVEITPQNQVLMTDTEAGTLHLLE
VDFPEGVLRRTERLQAQLCSPRGVAVSWLTGAIAVLEHPWPLGTSGNNTRVKVFSATMQL
IGQVDSFGLNLLFPSKITASAVVFDPQGNVIVADTCGPAIICLGRPEAFPALKPMITYDL
SRPVALAFTKENSLLVLDTASHSVKVFKALDGASVSSSTGTGDIPE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggaggaggcgggggtgcggcccgaactggtgcgcgaggcggaggtcagcctg
ctggagtgcaaggtgtgtttcgagaggttcggccaccggcagcagcggcgcccgcgcaac
ctgccctgtggccacgtggtctgcctggcctgcgtggccgcccttgcgcacccgcgatcg
ctggccttcgaatgtcccttctgccggcgggcctgcagagcctgtgacaccagcgactgt
cttccggtgttgcaccttttggagctcctgggctccacgcttcgcgcgtccccggctgcc
ctcaatgccgccccctgcgcgcccggggtgctcacctgtcaccacgcctttggcgggtgg
gggaccctggtgaaccccacggggcttgcactgtgtcccaagaccggacgggtcgtggtc
gtgcacgatggtaagaggagggttaagatctttgactccggaggaggtggtgcacaccag
tttggagagaagggggatgcagcgcatgacgtgaagtacccacaggacgtcgccgtcacc
aacgacttccacgtggttgtcaccgacgctggcgaccgctccctcaaagtgtttgatttc
tttggccagatcaagctggttgtgggaaagcagttttccctgccttggggtgtggagatc
acccctcagaaccaggtcctgatgactgacacagaggcagggaccttgcacttgctggaa
gtggacttccccgaaggggtccttcggaggactgagagattgcaagctcaactctgcagt
ccccgtggtgtggctgtgtcttggctcaccggagccatcgcagtcctagagcacccctgg
cccttggggacatcaggcaacaacacacgggtgaaggtgttcagcgccactatgcagctg
attggccaggtggatagcttcggactgaacctcctctttccctctaaaataactgcctca
gctgtagtcttcgatccccagggaaatgtgatcgtcgcagatacctgcggaccagccatc
atatgcttggggagacctgaggcgtttccggccctgaagcccatgatcacgtatgatctg
tctcgtcctgtggcactggccttcaccaaggagaattctcttcttgtgctggatacggct
tcccactctgtaaaagtctttaaagcgctggatggtgccagtgtttcctcctccacaggt
actggggacatccctgagtga
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