Arvicola amphibius (Eurasian water vole): 119816450
Help
Entry
119816450 CDS
T08327
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05202
Transcriptional misregulation in cancer
aamp05206
MicroRNAs in cancer
aamp05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
119816450 (Zeb1)
05206 MicroRNAs in cancer
119816450 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
119816450 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119816450 (Zeb1)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
119816450 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
119816450
NCBI-ProteinID:
XP_038189036
LinkDB
All DBs
Position
6:complement(87286496..87463040)
Genome browser
AA seq
1104 aa
AA seq
DB search
MINGLWNTLHSRIKWNLKIQVTNYNTVVEANSDSDDEDKLHIVEEESITDAADCEGVIPE
DELPADQTVLPGGSDREGATKNCWHEDVKDDECDSDAENEQNHDPNVEEFLHQQDTAIIY
PEAPDEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDN
FSCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSAGNRKFKCTECGKAFKYKHHLKEHL
RIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSAS
PGSPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGG
QLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQASLASK
EQEAVNASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENPVP
TNSCKSEKFPEDLTVKAEDKSCDGAADASTCLLCDDCPGDLDALPELKHYDPEHPSQPPA
PAPEAEKPESSASSARDGDLSPSQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPL
DVVKKWFEKMQAGQIPGQSPEPPSPETGSVNISAKSDEQPQTAEESEPQEDSTSGQSPLK
MTSSPVLPGGSAINGSRSCTSSPSPLNLSSARNLQGYSCVADGAQEEPQVEPLDLSLPKQ
QGELLERSTISSVYQNSVYSVQEEPLNLSCAKKEPQKDNCVTDSEPVVNVIPPSANPINI
AIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSTTVSPAMQEPPVKVIQ
PNGNQDERQDTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLRH
KYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHR
YSYCKREAEERDSTEQEQEEAGPEALMNEHVGARASPSQADSDERESLTREEDEDSEKED
DEDEDKEMEELQEEKECENPQGEEEEEEEEEEEEEEEEVNEGVHAAAAETDGAVEDGAAP
QAGSLEQKAGEGSEQLSEEKTNEA
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgataaatggcctttggaataccctgcattctaggataaaatggaacctaaaaatacaa
gttacaaattataatactgtggtcgaagcaaattcggattctgacgatgaagacaaactc
catattgtggaagaagaaagcatcacggatgcagctgactgtgaaggtgtcataccagag
gatgagctgccagcagaccagacagtgttaccaggaggcagtgacagggagggcgccacc
aagaactgctggcatgaagacgtaaaagatgatgagtgtgactcagatgcagaaaatgag
caaaaccatgaccctaatgtggaagagttcctgcaccaacaagacacggccatcatttac
cctgaggcgcctgatgaggaccagcggcagggcacaccagaagccagtggtcaagacgaa
aatggaacaccagacgcattttcccagttgctcacctgcccatattgtgatagaggctac
aagcgctttacctctctgaaagaacatattaagtatcgccatgagaagaatgaagacaac
ttcagctgctccctgtgcagttacacctttgcatacaggacccagctggaacggcacatg
acgtcacacaagtcaggaagagagcaaagacacgtgacgcagtctgcgggtaatcgtaag
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccacctaaaggagcacttg
cgcatccacagcggagagaagccatatgaatgcccaaactgcaagaaacggttttctcac
tcgggttcctacagctcacacataagcagtaagaagtgtattagcttgatgcctgtgaat
gggaggcccagatcaggactcaagacatcacagtgttcctcaccatctctttcggcatca
ccaggcagtcccacgcgcccacagatacggcagaagatagagaataagccccttcaagaa
ccgctttctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtg
gttgcttcaggaatcaactgttcaacccctttacaaaatggggtttttagcggtggtggc
caattgcaggcgaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagtt
ggtttggtatctcccataagtatcaatttaagtgacattcagaatgtacttaaagtggca
gtagatggtaatgtaattcggcaagttttggagaataatcaagccagtcttgcatccaaa
gagcaagaagcagtcaatgcttcatccatccaacagggtggtcattctgttatttctgcc
atcagtcttcctttagttgatcaagatggaacaaccaaaattatcatcaactatagtctt
gagcagcctagccaacttcaggttgttcctcagaatttaaagaaagaaaacccagtccct
acaaacagctgcaaaagtgagaagttcccagaagaccttactgtgaaggcagaggacaaa
agctgcgatggggctgcagatgctagcacttgccttctgtgtgatgactgcccaggagac
ctcgatgcacttccagaactaaagcactatgacccagaacacccttcccagcctccagcc
cccgccccagaagccgagaagccagagtcctctgcttcatcagccagagatggtgatttg
tctcccagtcagccacctttaaagaacctcctgtcactcttaaaagcctactatgctctg
aatgcgcagccaagtgcagaagagctctcaaagattgccgattctgtgaacctaccactg
gatgtggttaaaaagtggtttgagaagatgcaagctggacagattccagggcagtctcct
gaaccaccttccccagaaacgggctcggtaaacatctctgcaaagagtgatgagcagcct
caaactgcagaagaaagtgagccccaggaagacagcacaagtggacagagccccctcaag
atgactagctcccccgttttaccgggaggatcagccattaatggttccagaagttgcaca
tcatccccatcccctctgaacctctcctcagccaggaacctgcagggttactcttgtgtg
gcagacggtgcccaggaggagcctcaagtagaacctcttgatctctcactaccaaagcaa
cagggagagttactggaaaggtcgactatcagtagtgtttaccagaacagtgtttattct
gtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaaggacaactgt
gttacagactcagaaccggttgtaaatgtaatcccaccaagtgccaaccccataaatatc
gctattcctacggtcactgcccagttacccacaatcgtggccattgctgaccagaacagt
gttccctgcttgcgtgcgctcgctgccaacaagcagactattctgattccccaggtggct
tatacgtactcaactacagtcagccctgcgatgcaggagccaccagtgaaggtaatccag
ccaaatggaaaccaggatgaaaggcaagacactagctcagaaggagtctccaccgtggag
gaccagaacgactctgactctacgccacccaaaaagaagactcggaagacagagaacggg
atgtatgcatgtgacctgtgtgacaagatatttcagaagagcagctcactgttgagacac
aaatatgagcacacaggtaaaaggcctcatgagtgtggaatctgtaaaaaggcatttaaa
cacaaacatcatctgattgaacacatgcgattacactctggagaaaagccctatcaatgt
gacaagtgtggaaagcgcttctcacactcggggtcttactctcagcacatgaatcaccgc
tactcctactgcaagagagaggccgaggaaagagacagcacagagcaggagcaggaagag
gctgggccagaagccctgatgaatgagcatgtgggtgcgcgggcatctccctcacaggct
gactcggatgagagagaaagtttaacaagggaggaggacgaagacagtgagaaggaggat
gacgaggatgaggataaagagatggaagaattgcaggaagaaaaggaatgtgaaaaccca
cagggggaggaggaagaagaggaggaggaggaggaggaggaagaagaggaggaggtgaat
gaaggcgtgcatgcggcagcagccgagactgacggcgcagtggaggacggagctgctccg
caggcaggcagcttagagcagaaggcaggcgagggcagcgagcaactgtcagaagagaag
acaaatgaggcctag
DBGET
integrated database retrieval system
