Arvicola amphibius (Eurasian water vole): 119816537
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Entry
119816537 CDS
T08327
Symbol
Carmil1
Name
(RefSeq) LOW QUALITY PROTEIN: F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119816537 (Carmil1)
Membrane trafficking [BR:
aamp04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
119816537 (Carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Cep57_CLD
IL34
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
119816537
NCBI-ProteinID:
XP_038189211
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All DBs
Position
6:complement(124480430..124755246)
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AA seq
1364 aa
AA seq
DB search
MTDESSDVPRELMESIKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRGFLLSARI
PTKLELTFSYLEIHGVICHKPTQMVVETEKCNMSMKMESPEDVSDVLAHIGTCLRKLFPG
LSPLRILKKVSMEPSDRLASLQALWDSQTLAEPGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHMINLAGNPLEDRGVSSLSVQF
AKLPKGLKHLNLSRTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNALRGDDLSHLYNF
LAQPNTIVHLDLSNTECSLELVCSALLRGCLQCLAVLNLSRSVFSHRKGKEVPLSFKQFF
SSSLALMQINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSNCELRSGGAQVLEGCIAE
IHNIISLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRVCVKVQDHLNSLRSCGGDAIQEDLKAA
EQLMRDAKNSKTLLPNLYHVGSASWTGASGLSSSPIQETLESMAGEVTRVVDEQLKGLLE
SMVDAAENLCPSVMKKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILEALSNSHRKLADHYSRRGKSLPQRESLEVELAEEKPVKRATLMVED
LNEVERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPS
IRQEKRSSGLISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAICTVNIVPHDGEQNGLMG
RVDEGVDEFFTKKVTKMDSKRSSTRCSDAHELSEGDEKKKRDSRRSGFLNLIKSRSRSER
PPTVLMPEELSSPKGAIRSPPVDTARKDIKAAEHNGAAERTEETKTPEPLEEGPAEEAGR
TERSDSRGSPQGGRRYVQMMGSGLLAEMKAKQERRAACAQKKLINDVISQESSSPVLSTT
ERLDGGGTGLPEARFGLGTPEKNAKAEPKVDGGCRSRSSSSIPTSPKPLLQSPKPSPGVR
PSIPQKPRTASRPEDPDSPSGPSSPKVALLPPILKKVPSDKERDGQSSPQPSPRTFSQEV
SRRSWGPQAQEYQEQKQRSSGKDGHQGSKSSDSGEEAEKEFIFV
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagagctctgatgtcccccgggagttgatggaaagcataaaggatgtgatt
ggcaggaagatcaaaatctcagtgaagaagaaggtgaagttggaagtgaagggagacaga
gtggagaacaaagtgctggtgctcacgtcatgccgaggcttcctcctgtcagcgcgcatc
cccactaagctcgagttaaccttcagctatctggagattcatggagtcatctgccacaag
ccaactcaaatggttgtggaaactgagaagtgtaacatgtccatgaagatggagtcaccg
gaggatgtgagtgatgtgctggctcacataggcacctgcttgcggaagctgttcccaggc
ctctccccactgagaatcctgaagaaagtctccatggagccatctgatcgcctggccagt
ctccaggccctgtgggacagccagaccttggctgagccaggcccctgtggtgggttttcg
cagatgtatgcctgtgtgtgcgactggctggggttttcctacagggaagaagtgcagtgg
gatgtggatacaatttatctgacacaagacaccagggaattgaatttgcaagacttcagt
caccttgagcacagagacctgatccccatcattgctgccctggaatataatcagtggttc
accaaactgtcctccaaggatcttaagctgtccacagatgtctgtgaacagattttgagg
gtggtgagtaggtccaatcgactggaagagttggtgttggagaatgctgggctcagaaca
gattttgcacagaagttggccagtgctctagcacataatcctaactcaggccttcacatg
atcaacctcgccgggaacccgctggaggaccgaggtgtatcctccttaagtgttcagttt
gccaaactcccaaagggactgaagcatttaaacctctcgagaacctcattgtcacctaaa
ggggtgaacagcctttgtcagtccctcagtgccaaccctctgactgcctctactctgacc
cacctggacctctcagggaatgctctccgtggagatgacctctcgcacttgtacaatttt
ttggcccagcccaacaccatcgttcacctggacttatctaacacagaatgttctctggaa
ttggtgtgtagtgctcttctccgggggtgccttcagtgtctagctgtgctcaatctctcc
agatccgtcttctctcacaggaaaggaaaggaagtccccttatctttcaagcagtttttc
agcagttctctggctttgatgcaaatcaatctttcaggcacgaaactgtctccggagccc
ttgaaggcactgctcttgggcctggcctgcaatcatagcttgaagggggtctctctggac
ctcagcaactgtgagctgagatctggaggagctcaagtgttagaaggctgcatcgccgaa
atccacaacatcatcagcttagacatctctgacaacgggctagaatccgacctctctacc
ctgatagtgtggctcagcaaaaacagatcgatacagcacctggcgctaggcaaaaatttt
aataatatgaaatccaaaaatctgacgcctgtgttggacaacttagtgcagatgatccag
gacgaagaatctccgctgcagtctttgtccctggctgactcaaaactcaagaccgaggtc
accatcatcatcaatgccctgggcagcaacacctccttgaccaaagtggacatcagtggg
aatggcatgggggatatgggagccaagatgctcgccaaggctctgcagatcaacaccaag
ctcaggacagtcatctgggacaaaaacaacatcaccgcacaaggctttcaagatatagcc
gttgctatggaaaagaactacacgctgagattcatgccaattcctatgtacgatgcttcc
caagctcttaaaacaaaccccgagaagacagaagaagctctacaaaagatagaaaattat
ctgctccggaatcacgagacgagaaaataccttcaggagcaggcctaccgcctccagcag
ggaattgtcaccagcaccacccagcagatgattgaccgggtatgtgtgaaggttcaggat
cacctcaactccttgcggtcctgtgggggcgatgctattcaagaggatttaaaggcagcc
gagcagctcatgcgtgatgctaagaactctaaaacgttgttaccgaatttataccacgtg
ggcagtgcttcctggacaggggccagtggcctgtcatccagccccattcaggagaccttg
gaatcaatggccggagaagtcacaagagttgtcgatgaacaactgaagggtttgcttgaa
tccatggtggatgctgctgagaacctctgccccagtgtgatgaaaaaagcccacatccga
caagacctgatccatgccagcaccgaaaagatttccatcccacgcacctttgttaaaaat
gtcctcttggaacagtctggaattgacattcttaacaaaattagtgaggtgaagctgaca
gtggcctcatttttgtctgaccgcatcgtggatgaaatcctggaggcgctctccaacagc
catcggaagctggcggatcattatagcaggcgaggcaagagccttccccaacgagagtcc
ctagaggtggagctagccgaggagaagccagtgaagcgtgccacgcttatggtggaggat
ctcaacgaggtggagaggttggaagacctagacacatgtatgatgacgcccaagtccaag
aggaagagcatccacagccgaatgctgcggcctgtttccagggcgtttgaaatggaattt
gatcttgacaaagccctggaagaggtgccgatccacattgaagacccgcctttcccatcc
atccggcaggagaagcgaagctcaggcttgatttccgagctgccttcggaggaaggcagg
agactggaacactttaccaagttacggcccaagcggaacaagaagcagcagcccacacag
gcagcgatctgtaccgtcaacatcgtcccccatgatggagaacagaatggcctcatgggc
agagtggatgaaggtgtagatgaatttttcaccaagaaggtgactaaaatggacagcaag
aggtcatccacacgctgctcagatgcccatgaactgagcgaaggagatgagaaaaaaaaa
cgggattctcggagaagtggctttctcaacctaatcaaatcacgatccagatctgagcgg
ccacccacggtcctgatgccggaagagctctcctccccaaagggggcaatccggagtcca
ccagtggacaccgctaggaaggacataaaggcagctgagcacaatggtgctgcggagcgc
accgaggagacgaagacaccggaacccctggaggagggcccggcagaggaggcaggcaga
accgagcgcagcgacagcaggggtagcccacagggtggccggcgctatgtgcagatgatg
ggcagcgggctgctggctgagatgaaggccaagcaggagcggagagctgcatgcgcacag
aagaagcttatcaatgatgtcatctcccaggagtcctccagcccagtcttgagcaccaca
gagcggttggatggaggtgggacaggtcttccagaggcccgctttggtttgggaacaccg
gaaaagaatgccaaagcagaacccaaagtggatgggggctgcaggtctcggagctcctcc
agcattcccaccagtccgaagcccctcctgcagtcccccaagccaagccccggagtccgg
ccttccatcccccagaagccaagaactgcctcccgacctgaagatccagactctccatct
ggtcctagttcccctaaagttgctcttcttccacccatcctcaaaaaagtcccctcggac
aaggagcgtgatggccagagcagcccccagcccagtcccaggaccttctcccaggaagtc
tcaaggagaagctggggtccgcaggcccaggagtatcaagaacaaaagcagcggtcctcc
ggcaaagatggtcaccaagggagcaaatccagtgactccggagaagaagcagaaaaagag
tttatttttgtgtaa
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