Arvicola amphibius (Eurasian water vole): 119816718
Help
Entry
119816718 CDS
T08327
Symbol
Atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04136
Autophagy - other
aamp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119816718 (Atg4c)
04136 Autophagy - other
119816718 (Atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamp01002
]
119816718 (Atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119816718 (Atg4c)
03029 Mitochondrial biogenesis [BR:
aamp03029
]
119816718 (Atg4c)
Peptidases and inhibitors [BR:
aamp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
119816718 (Atg4c)
Membrane trafficking [BR:
aamp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
119816718 (Atg4c)
Mitochondrial biogenesis [BR:
aamp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119816718 (Atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
119816718
NCBI-ProteinID:
XP_038189545
LinkDB
All DBs
Position
6:complement(48334487..48403472)
Genome browser
AA seq
458 aa
AA seq
DB search
MEASGTDEVDKLKSKFMSAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKMLP
SRSGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEASALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALHIENSDSDSWTSNTVKKFTASLEASLSGERELRTPAVSLKE
TIRKHPDDLEAQNEICHRKIVSWFGDSPVSVFGLHRLIEFGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGLTIYVAQDCTVYNADVIDKQTDSVTSGDARDKAVIILVPVRLGGE
RTNTDYLEFVKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQPFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCQNVQDFERASEEITKMLKISSKEKYPLFTFVN
GHSRDFDFTSTAASEEDLFSEDEKKKFKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttcaggaacagatgaagttgacaagctaaaatctaaatttatgtctgcttgg
aacaacatgaagtacagttgggtgctgaaaacaaagacgtattttagtagaaactcacct
gttttattacttggaaaatgttatcattttaaatacgaagatgaaaacaagatgttgcct
tcaagatcaggatgtaccattgaagatcatgtgattgcgggaaatgtggaggaattccgt
aaggatttcatttctagaatttggcttacctacagggaagaatttcctcaaatagaagct
tcagccttgacgacagactgtggctggggctgtacactgagaactggccagatgctcttg
gctcaagggctcatactacactttctcgggagagcttggacctggcccgatgcactgcat
attgagaactcagactctgactcgtggacttccaacaccgtcaaaaagtttactgcatca
cttgaagcctcgctttcaggggaaagggagctcagaactccagcagtttctctgaaggaa
acgatcaggaagcatcctgacgaccttgaagcgcagaacgagatttgccacaggaaaatt
gtctcttggtttggagactcccctgtgtctgtcttcggcttacatcgactgatagagttc
gggaagaagtctgggaaaaaggctggagattggtacgggccagccgtggttgctcacatt
ttaagaaaagcagtagaagaagcaagacaccctgacttacaaggactaactatttatgtt
gcgcaggattgtacagtttacaatgctgacgtaatcgataaacagaccgactctgtgacc
tctggggacgccagggacaaggctgttattatcttagttcctgttagacttggtggcgag
agaaccaacactgattatctggagtttgtgaagggtgttttaagccttgaatactgcgta
ggtattattggcggcaaacctaaacagtcgtattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccagccttttgtagatgtcagcataaaggatttc
cctctcgagacattccactgtccttctcctaagaagatgtcatttcggaagatggatcct
agttgtacgataggattttattgtcaaaacgtccaggactttgaacgagcatctgaagaa
atcaccaagatgttgaaaatttcctctaaggagaaatatccattatttacttttgtaaac
ggccattccagagactttgattttacttctactgcagccagtgaagaagaccttttctca
gaggacgaaaagaaaaaattcaaaagatttagcacagaagagtttgtcctactttaa
DBGET
integrated database retrieval system
