Arvicola amphibius (Eurasian water vole): 119816812
Help
Entry
119816812 CDS
T08327
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
aamp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119816812 (Syvn1)
04120 Ubiquitin mediated proteolysis
119816812 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119816812 (Syvn1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119816812 (Syvn1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119816812 (Syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119816812
NCBI-ProteinID:
XP_038189712
LinkDB
All DBs
Position
1:149963877..149971038
Genome browser
AA seq
612 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGAPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAAVSRPSGTA
TTTAAGTSTSAPASGAAPGPEVAPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEEA
ASAVVSAAPSTSVPSSEAPSPSPGASSPAPEAEKPPAPESVGAAEELPEDGEPDAAELRR
RRLQKLESPVAH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgactggggcagtggtggct
catgcctactacctcaaacaccagttctaccccactgtggtgtatttgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttcctcttgggcaaagtg
atgggcaaggtgttctttgggcagctgagggcagcggagatggagcaccttttggagcgg
tcctggtacgctgtcaccgaaacctgtttggccttcactgtttttcgggatgacttcagt
cctcgcttcgtggcgctctttactctcctcctcttcctcaagtgtttccattggttggct
gaggaccgtgtggactttatggagcgcagccccaacatctcctggctcttccactgccgc
attgtctctcttatgttcctcctgggtatcctggacttcctctttgtcagccacgcttat
catagcatcctcacccggggggcttctgtgcagctggtgtttggctttgagtatgccatt
ctgatgaccatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agcgagaacccctgggacaataaggctgtatacatgctctacacggagctgttcacaggc
ttcatcaaagtcctgctgtacatggcattcatgaccatcatgatcaaggtgcacaccttc
ccactcttcgccattcggcccatgtacctggctatgaggcagttcaagaaagctgtgaca
gacgccatcatgtctcgccgagccatccgcaacatgaacacattgtacccagatgccacc
cccgaggagctgcaggcaatggacaacgtctgcatcatctgccgagaggaaatggtgaca
ggcgctaagagactgccctgcaaccacatcttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgcccgacctgccgtatggatgtcctgcgagcatctttgccagcc
cagtcaccaccaccccctgagcctgctgaccaaggagcaccccctgctcctcatcctcca
ccactgctgccacagcctcccaacttcccccagggcctcctgcctcctttccctccaggc
atgttcccactgtggcccccaatgggtccctttccaccagtcccacctcccccaagctca
ggagaggctgcagctcctccgtccaccagtgcagctgtttctcggcccagtggaacagcc
accaccacagctgctggcaccagtacttctgccccagcatctggtgctgcccctggccca
gaggttgcccctgccccaggcttccccttccctcctccttggatgggtatgcccctgcct
ccaccttttgccttccccccaatgcctgtgccccctgcgggctttgccggcctgacccca
gaggagctgcgggcactggagggccatgagcggcagcacctggaggcccggctgcagagt
ctgcggaacatacacacactactggatgccgccatgctgcaaatcaaccagtacctcact
gtgctggcctccttagggccccccaggccagctacttcagtcaaccccactgaagaggct
gcctctgcagtggtatctgctgccccctccaccagcgtccccagctctgaggccccatcc
ccatccccaggagcctcctcaccagcccctgaagctgagaagcctccggctcctgagtcg
gtgggcgctgcagaggagcttcctgaggacggagagcctgacgctgcagaactccgccgg
cgtcgcctgcaaaagctggagtcccctgttgcccactga
DBGET
integrated database retrieval system
