Arvicola amphibius (Eurasian water vole): 119816848
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Entry
119816848 CDS
T08327
Symbol
Tdrd1
Name
(RefSeq) LOW QUALITY PROTEIN: tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119816848 (Tdrd1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119816848 (Tdrd1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
zf-MYND
SMN_Tudor
Agenet
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
119816848
NCBI-ProteinID:
XP_038189779
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Position
1:196155839..196203604
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AA seq
1226 aa
AA seq
DB search
MLQRQVGVKGPFQGRRPGHQGAGRGVKMGLGLGSLEAGSWQLDVETSVNAKLPPNMIPRS
NLEASTCKMAEPFNFEKKESKLPPQDLLRSPVAQHNHPNFRLKSPESGNKNSFLLCEQSK
QYLASQEDNSVVSSNPAGINGEVGGSKGDRKTVPTGNPVSPLSLGNNSPPKQVKTKPSNN
VSPEKQKKSHKSFENALSVSNAALFSSLGPPLRSTTCHRCGLFGSLRCSQCKQTYYCSTA
CQRRDWSSHSTICRPVQQSSHKLEDNKSPFETKTADVKSEGDCPLGTAKEMTARTERVMF
SDLRSLQLKKTMEIKFTEFKNPSNFYVQLYSSEVLEYMSQLSASLKETYADMVPEDGYLP
VEGEVCVAKYTVDQTWNRAVIRGVDEFQKKAHVFYIDYGNEEVIPMDRIHQLSKSIDLFP
PSAIKCFVAGVLPAEGEWSEDCAAAXEALLLEQHCTVRIVDVLEEGALACAVDVVLEGSG
KQLDHMLVEMGYGVKPDVHNSEKQSVDQSAPEDIGRVTPESKTVIDRNALIPKVLSLSVG
EEFCGVVAHIQTPEDFFCQQLQSGHKLAELQESLSEYCGQVTPRSDFYPTIGDVCCAQFS
EDDQWYRASVLAYASEESVLVGYVDYGNFEILSLKRLCPIIPKLLDLPMQALNCVLAGVK
PSLGIWTPEAICFMKKIVQNKMVTVRVVDMLGTRSLVELVDKSVVPHLSASKALIDSGFA
VEEKETVADKTSGVHTASVPLATEETAESLEWTWVEFTVDETVDVVVCVMYSPGEFYCHF
LKDDALKKLDDLNKSLAEYCAQKLPNGFKAEVGRPCCAFFTGDGNWYRALVKEILPSGNV
KVRFVDYGNVEEVTRDQLQAISPQLLLLPFQGTQCWLVDIQPQNEHWTKEATARFQACVV
GLKLQARVVEITEKGLGVELTDLSTPYPKIISDILITEHLVLKSGSPQKESSVCRLANKH
NQTDTQGVPAIPSAEQWKTIELPLNKTVPANVLEIVNPYLFYAIPSEMPENQEKLCVLTA
ELLEHCSAQKGPPSYRPRTGEACCAKYTGDDLWYRAIVLETSDSDVKVLYADYGNMETLP
LSRVQPVPAGRLELPFQIIRCSLEGMMELNESCSQLAMELLKSTMLNQSVVLSVRGISKN
VHIVSVEKCSENGVVNIAEKLLMCGLAETLPSKRKGATAAETTRNSDCCCMELQKQIQKH
EQILLFLLNNPTNQNKFIEMKKLLKS
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagagacaggtcggggtcaaaggccctttccagggcaggaggcctgggcaccag
ggtgcaggacgcggcgtcaagatgggcctcgggcttgggtcgttggaagccggaagttgg
cagctggacgttgagacttcagtgaatgctaaattgccacctaatatgattccacgaagt
aatttggaagcctctacttgtaaaatggcagagccatttaattttgagaaaaaggaaagc
aagcttccaccacaggatttactaagaagccctgtagcacagcataatcatcccaacttc
agactgaaaagcccagagagtggaaataaaaacagtttcttgctttgtgagcaaagcaaa
cagtatttagctagtcaggaagacaattcggtggtctcttcaaaccctgctggtatcaat
ggagaagtaggtggatccaaaggagacaggaagacagtgcccacagggaacccagtgtca
ccattaagtcttggaaacaattcaccacccaagcaagtaaaaactaagcccagcaataat
gtgtctcctgaaaaacaaaaaaaatcccacaagtcgtttgagaatgccttgtctgtaagt
aatgcagcgctcttcagctctttaggaccgccccttcggtcaaccacctgccaccgctgt
ggcctgtttgggtcgctgaggtgttcccagtgcaagcagacgtactactgctccacagcc
tgccagaggagggactggtcttcccacagcaccatctgcagaccggtgcagcagagttcg
cacaagctggaagacaataaatcaccgtttgaaacaaagaccgctgacgtgaaaagtgag
ggtgattgtcccctgggaactgctaaagaaatgactgctagaacggagagagtgatgttt
tctgatttgagaagtctgcaactcaagaaaaccatggaaataaagtttactgaattcaag
aacccaagtaacttttatgtccagttgtattcttcggaggttctagaatacatgagccaa
ctgtctgcaagtttgaaggagacatatgcagatatggtgcctgaagatggttatcttcct
gttgagggggaagtttgtgttgccaagtacacggttgatcagacctggaacagagcagta
atacgaggtgttgatgagttccagaagaaggcacatgtcttctacattgattatggaaat
gaagaagtcattcccatggacaggattcaccagctaagcaagagcattgacttgtttcct
ccttctgccataaagtgctttgtggcaggcgtcctcccggccgagggcgagtggagcgag
gactgtgctgcagccnatgaggccctgctgctggagcagcactgcacagtccggatcgtg
gatgtgctggaggagggggcactcgcctgtgccgtcgatgtcgtgctagaaggttcagga
aaacagctggaccacatgcttgtggaaatgggatatggtgtaaaaccagatgtgcacaac
tccgagaagcaaagtgtggaccaaagtgctcctgaggacattggaagagtgacccccgag
agtaagaccgtgatagacagaaacgccctgatccccaaagtgctgagcctgagtgtgggt
gaggagttctgtggagtggttgcgcacatccagactccagaggacttcttctgccagcag
ctgcagagcggccacaaacttgcagaactgcaggaatctctcagcgagtactgtggccaa
gtgacaccacgctctgatttctatccaaccatcggggatgtgtgttgtgctcagttctca
gaggatgaccagtggtaccgtgcctcggttctggcctacgcttctgaagaatctgtcctg
gttggctatgttgattatggaaactttgaaattcttagtttgaaaagactttgtcccata
attccaaagttgttggacttgccgatgcaagccctaaattgtgttctggcaggagtgaag
ccatcattaggaatttggactccagaagctatttgtttcatgaaaaagattgtccagaac
aagatggtcaccgtgagagtggtggacatgctggggaccaggtccctggtggagctcgtg
gacaagtctgtggtgccccacctcagcgcttcgaaagctctcatagactcaggctttgct
gtagaggaaaaggagacagtggcagacaaaaccagcggcgtgcacacagccagcgttccc
ttggccacagaagaaacagctgagtcattggagtggacgtgggttgagttcaccgtggat
gaaaccgtggatgtggtggtctgcgtgatgtacagccctggagagttttactgtcacttt
ctcaaggacgatgctttaaagaagcttgatgatttgaataaatccttagcagaatattgt
gcacagaagctgccaaatggcttcaaggcagaggtaggacggccttgctgcgcatttttc
acaggtgatggcaactggtaccgggctctggtcaaggagatcttaccgagtggaaatgtt
aaagtgcgctttgtggattatggcaacgttgaggaagttaccagagaccaactccaggcg
atatcaccacagttgttactgcttccgtttcaggggacgcagtgctggctcgtagatata
cagccccaaaacgagcattggacaaaagaagctacagcaagatttcaagcatgcgttgtg
gggctcaaactccaagccagagttgtggaaatcactgagaaggggttgggagttgaactc
accgacctttccactccttatcccaaaataattagtgacattctcatcacagaacatttg
gttttaaaatctggttcaccacagaaggaatcatcggtttgcagacttgctaacaaacat
aaccagacggacacccagggagtaccagccatcccttcagcagagcagtggaagacaata
gaattgccacttaacaagaccgtgccagcaaacgtgttagaaatcgtgaacccatactta
ttctatgccatccccagtgaaatgccagaaaatcaagaaaagctgtgtgtgttaactgcg
gaattgttagaacactgcagtgctcagaaaggcccgccatcctacagaccgaggacgggg
gaagcatgctgtgccaaatacacaggtgatgacctctggtaccgggccattgttctggaa
acgtcagactctgatgttaaagtactctatgcagattatggaaacatggaaaccctgcct
ctttccagagtgcaaccggtccctgccggccgcctggagctccccttccagatcattaga
tgctcgcttgaaggaatgatggaattgaatgaaagctgttcacagttagccatggaactt
ctgaaaagcaccatgctgaatcagagcgtggtcctttctgtgaggggaatttcaaaaaat
gtccacatagtgtcagttgaaaagtgttctgagaacggtgtggtcaacatcgctgagaag
ctgctgatgtgcggtctggcggagaccctgccgtctaaaaggaaaggtgctacagctgca
gaaacaacacgcaactcagactgctgctgcatggagttacagaaacagattcagaaacat
gaacagattcttctcttcctcttaaacaatccaaccaaccaaaataaatttatagagatg
aaaaagctgttgaaaagctaa
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