Arvicola amphibius (Eurasian water vole): 119816866
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Entry
119816866 CDS
T08327
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
119816866 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119816866 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aamp03310
]
119816866 (Rorb)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119816866 (Rorb)
Nuclear receptors [BR:
aamp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119816866 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119816866
NCBI-ProteinID:
XP_038189827
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All DBs
Position
1:complement(160534466..160712940)
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSSIGNGLSNLNTETSGAYANGHVIDLPKSEGYYNIDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCAAACK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgacaaatcctccgggatc
cactacggcgtcatcacgtgtgaaggctgcaagggattcttcaggagaagccagcagaac
aatgcctcttactcctgcccaaggcagagaaactgtttaattgacagaaccaacaggaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagagatgctgta
aagttcgggagaatgtccaagaagcagcgtgacagcctgtatgctgaggtgcagaagcac
cagcaaaggctgcaagagcagcggcagcagcagagtggggaggcagaggcccttgccagg
gtgtacagcagcagcatcggtaacggtctcagcaacctgaacaccgaaaccagcggcgcc
tacgccaacgggcacgtcattgacttgccgaaatccgaaggatattacaacatagattct
ggtcagccatctcccgatcaatcaggactggacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgttcacctatagctctttcaacaat
gggcagttagcccctgggataacgatgactgagatcgatcgaattgcacagaacatcatt
aagtcccatctggagacttgccagtacacaatggaggagctacatcagctggcgtggcag
acccacacctacgaggaaataaaggcatatcaaagcaagtccagggaggctctgtggcag
cagtgcgccatccagatcacccatgccatccagtacgtggtggagttcgcaaagcgaata
acaggcttcatggagctgtgtcagaacgaccagattttactgctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaatccattaaataacactgttctgttt
gaaggaaaatatggaggaatgcagatgttcaaagccttaggttctgatgacctggtgaac
gaagcgtttgactttgcgaagaatctatgttccttgcagctgactgaggaggagatcgct
ttgttctcttctgctgttctgatatccccagaccgagcctggctgatagaaccaagaaag
gtccagaagcttcaggaaaaaatctattttgcacttcaacatgtgattcagaagaatcac
ctggatgacgagaccctggcaaagttaatagccaagataccaactatcacagcagtctgc
aacttgcatggggagaagctgcaggtatttaagcaatctcatccagacatagtgaataca
ctgtttcctcccttgtacaaggagctctttaatcctgactgtgctgccgcctgcaaatga
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