Arvicola amphibius (Eurasian water vole): 119816998
Help
Entry
119816998 CDS
T08327
Symbol
Tnc
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp05165
Human papillomavirus infection
aamp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119816998 (Tnc)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119816998 (Tnc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119816998 (Tnc)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119816998 (Tnc)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119816998 (Tnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119816998 (Tnc)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119816998 (Tnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
Interfer-bind
NDNF
FN3_Tor_3rd
DUF4998
hEGF
fn3_2
Motif
Other DBs
NCBI-GeneID:
119816998
NCBI-ProteinID:
XP_038190046
LinkDB
All DBs
Position
6:82257951..82315750
Genome browser
AA seq
2110 aa
AA seq
DB search
MGAMTWLLPGIFLASLALTSEGGVLKKVIRHKRQSGVNMTLPEESQPVVFNHVYNIKLPV
GSQCSVDLESANGEKDLTPMPESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELEMLVSSLREQCTMGTGCCLQPAEGRLDTRPFCSGRGNFSAEGCGCVCEPGW
KGPNCSDPECPGNCNLRGQCLDGQCVCDEGFTGEDCSQLACPNDCNDQGRCVNGVCVCFE
GYAGVDCGLEVCPVPCSEEHGMCVDGRCVCKDGFAGDDCNEPLCLNNCYNRGRCVENECV
CDEGFTGEDCSELICPNDCFDRGRCVNGTCYCEEGFTGEDCGELTCPNNCQGRGQCEEGQ
CVCDEGFAGADCSEKRCPADCHHRGRCLNGQCECDDGFTGTDCGDLQCPNGCSGHGRCVN
GQCVCDEGYTGEDCSQQRCPNDCHNRGRCVQGKCICEQGFKGFDCSEMSCPNDCHGHGRC
VNGMCVCDDDYTGEDCRDRRCPRDCSQRGRCVDGQCICEDGFTGPDCAELSCPNDCHGHG
RCVNGQCICHEGFTGKDCKEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPGDCNN
QGQCVSGRCICSEGYTGEHCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDQTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLRF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKKVTTTRLDAPSQIEVRDITDTTALVTWFKPLAEIDGIELSYGIK
DVPGDRTTIDLTHEENQYSIGNLRPDTEYEVSLVSRRVDMASNPAKETFTTGLDAPKNLR
RVSQTDNSITLEWRNVKADIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTE
YGIGISAVKGDKESDPATINAATEIDAPKDLQVSETSQDSLTLFWKTPLAKFDRYRLNYS
LPTGQSKEVQLPKDATSHVLTDLEPGQEYTVLLTAEKGRHKSKPAHVKASTERAPSLQNL
TMTETGWDALRLNWTTDDLAYEYFVIQVQEANKVEATHNFTVLGNLRATDIPGLKSATPY
RVSIYGVAQGSKTPVLSIEASTGRTPNLGEVSVSEVGWDALRLNWTAPEGVYQNFFIQVL
EADVVQSVQNLTVPGGLRSVDLPGLKAATRYRISIQGLTQDSNTDPLSVEILTEELPQLG
GLSVTEVSWDGLTLNWTTDDLAYKHFVIQVQEANNVEATQNLTVPGSLRAVEIPGLKADT
PYRVSIYGVLQSYRTPVLSAETSTAKEPQIGNLNVSGVTHEGFNLSWTATDGIFDMFTIE
IIDSNRLLQTTERNISGADRTAHISGLPPSTDFIVYLSGIAPSIRTKTISTTATTEALPL
LENLTISDTNPYGFTVSWTASENAFDSFVVTVVDSGKLLDPQEFTLSGTQRKLELRGLIT
GIGYEVLVSGFIQGHQTTPLRAEAVTEAELEVDNLLVSDATPGGFRLSWTADEGIFDSFV
LRIRDTKKQSEPQEITLPSPERTRDITGLREATEYEIELYGISGGRRSQPVSTIATTAMG
SPKEITFSDITDNAATVSWKAPTAPVESFRITYVPMTGGVPAMVLVDGTDTETRLVKLTP
GVEYHVSIIAIKGFEESDPVSGSLTTALDGPSGLQTANITDSEALAMWQPAIATVDSYVI
SYTGERVPEVTRTVSGNTVEYELQDLEPATEYTLRIFAEKGHQKSSAVTTKFTTDLDSPR
DLTATDVQSETALLTWRPPRASITGYLLVYESLDGTVKEVIVGPDTTSYSLADLSPSTHY
TVRIQALSGSLRSKLIQTIFTTIGLLYPFPRDCSQAMLNGDTTSGLYTIYINGDKTQALD
VYCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITAQGQYE
LRVDLQDHGESAFAVYDRFSVGDAKSRYKLKVEGYSGTAGDSMNYHNGRSFSTYDKDTDS
AITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSNF
RNLEGRRKRA
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgggggccatgacctggctattgccaggcatttttctagcttctcttgccctcacttct
gaaggtggggtcctcaaaaaagtcatccggcacaagcgacagagtggagtgaacatgacc
ctgccagaggagagccaaccagtagtgttcaaccacgtctacaacatcaagttgcccgtg
ggctctcagtgttcagtggatctcgagtcagcgaatggggagaaagacctgacgcccatg
ccagagtccagtggaagcttccaggaacacacagtggatggagaaaatcagattgtgttc
acacaccgcatcaacataccccgccgggcctgtggctgtgccgcagctcctgatgtaaag
gaactcctgagcaggctggaggagctggagatgctggtgtcatctctaagggagcagtgc
accatgggtactggctgttgtctccaacctgcagaaggccgtctggacaccaggcccttt
tgcagtggccgaggcaacttcagtgctgaaggatgtggctgtgtttgtgaaccaggctgg
aaaggccccaactgctctgatcccgaatgtcctggaaactgtaacctccgaggccagtgc
cttgatggacagtgtgtctgtgatgagggcttcactggtgaagactgcagccagctggcc
tgccccaatgactgcaatgaccagggcaggtgtgtgaatggagtctgtgtgtgctttgaa
ggctatgccggggtcgactgtggcctggaagtctgcccagtgccctgcagtgaggagcac
gggatgtgtgtggatggtaggtgtgtgtgcaaagatggctttgctggtgacgactgcaac
gagcccctgtgcctcaacaactgctacaaccgtgggcggtgcgtggagaacgagtgcgtg
tgtgacgagggcttcacgggtgaagactgcagtgagctcatctgccccaatgactgcttc
gaccgcggccgctgtgtcaatggcacctgctactgtgaggaaggcttcacgggcgaagac
tgtggtgagctcacctgccccaacaactgccagggccgtggccagtgcgaggagggacag
tgtgtttgcgacgagggctttgctggtgcagactgcagtgagaagcggtgtcctgccgat
tgtcaccaccgtggccgctgcctcaacgggcagtgcgagtgtgatgatgggttcacgggg
actgattgtggggatctgcagtgtcccaatggctgcagtgggcatggccgctgtgtcaac
gggcagtgtgtgtgtgacgagggatacactggcgaagactgcagccagcagcggtgcccc
aatgactgtcacaaccgggggcgctgtgtacagggcaagtgcatctgtgaacaaggcttc
aagggttttgactgtagtgagatgagctgtcccaatgactgccatggccatggccgctgt
gtgaatggcatgtgcgtctgtgacgatgactacaccggggaagactgcagagaccggcgc
tgtccccgggactgcagccagcggggccgctgtgtggatggacaatgtatatgtgaggat
ggcttcactggccctgactgtgccgagctctcctgccccaacgactgccatggccatggc
cgctgcgtaaatggccagtgcatctgccatgagggcttcactggcaaagactgcaaagag
caaaggtgccccagcgactgccatggccaaggccgctgtgaggacggccagtgcatctgc
cacgaaggcttcacaggactggactgtgggcagcgctcctgcccaggtgactgtaacaac
cagggacaatgtgtctcaggccgctgcatctgcagtgaagggtacacaggggaacactgc
tctgaagtatcgcctcccaaagacctcattgtgacagaagtaacagaagagactgtaaac
ctggcatgggacaatgagatgcgggtcaccgagtacctaattatgtatacacccactcat
gctgatggtctggagatgcaattccgtgtgcctggggaccagacttccaccaccatccgg
gagcttgagccaggggtggaatacttcatccgtgtgttcgccatcttggagaacaagagg
agcatccctgtcagtgccagggttgccacctacttgcctgcacccgaaggactaagattc
aagtctatcaaggagacatctgtggaagtggaatgggatcctctagacattgctttcgaa
acgtgggagatcatcttccggaatatgaataaagaagatgagggggaaattaccaaaagc
ttgaggcgaccagagacctcttaccgacaaactggccttgctcctgggcaagaatacgaa
atatccctgcacattgtgaaaaacaacacccgaggccctggcttaaagaaagtgaccaca
acccgcctggatgcccccagccagatcgaggtaagagacatcacagacaccacagccctg
gtcacctggttcaagcctctggctgagattgatggcatcgagctttcctatggcatcaag
gacgtgcctggggaccgcaccaccatcgacctcacacacgaagagaaccagtattctatt
gggaacctgcggcctgacaccgagtatgaggtgtccctcgtctcccgcagggtggacatg
gcaagcaaccctgccaaggagaccttcaccacaggcctggatgcacccaagaaccttcgc
cgtgtctcccagacagacaacagcatcaccttggagtggaggaacgtcaaagccgacatc
gacagttacagaattaagtacgcacctatctcaggaggtgaccatgctgaggttgatgtt
cccaagagccagcaagccacaaccaaaaccacactcacaggtctgaggccaggaactgaa
tatggcattggcatttctgctgtgaagggagacaaggagagtgacccagcaaccatcaat
gcagccacagaaattgatgcacccaaggacttgcaggtgtccgaaacctcacaggacagt
ctcactctattctggaagacaccactggctaagtttgatagataccgcctcaactacagc
ctccccacaggccagtcaaaagaggtccagttgccaaaggatgccacctcccatgtcctg
acagatctggaaccagggcaagaatacactgtccttctcactgctgagaagggcagacac
aagagcaagcctgcacatgtgaaggcatccacagaacgagcaccttccctgcaaaatctc
accatgactgagaccggctgggatgccctcagactcaactggacaacagatgacctggcc
tatgagtactttgtcattcaggtgcaggaagccaacaaggtggaggctactcacaacttc
acagtgcttggcaacctccgggctacagacatcccggggctcaagtcggccactccttat
agagtctccatctatggggtagcccagggctctaagacaccagtgctctctattgaggcc
tccacagggagaactcccaatctgggagaggtctcagtctcggaggtgggctgggatgcc
ctcaggctcaactggacggccccagaaggggtctatcagaactttttcattcaggtgtta
gaggctgacgtggtccagagtgtccagaacctcacagtccctggaggactgaggtcagtg
gacctgcctgggctcaaagcagccactcgctaccggatcagcatccaagggctcactcag
gactccaacacagaccctctctctgttgaaatcttgacagaggagctccctcagctggga
ggcttatccgtgaccgaggtcagctgggatggcctcacactcaactggacgacagatgac
ctggcctataagcactttgttattcaggtgcaggaggccaacaatgtggaggctactcag
aatctcacagtacccggtagcctccgggctgtggaaatcccaggcctcaaggctgacact
ccttatagagtctccatctatggggtgctccaaagctatagaacaccggtgctctctgct
gagacctccacagccaaagaacctcaaattggaaacttaaatgtttctggcgtcactcat
gagggcttcaatctctcctggacagcgaccgatgggatcttcgacatgtttactattgaa
attattgattccaataggttgctgcaaacgacagaacgtaatatatctggtgctgaccga
actgcccacatctcagggctcccccctagtactgatttcattgtctacctctctggaatt
gctcccagcatccggaccaaaaccatcagtaccacagccaccacagaggccttgcccctt
ctggaaaatttaaccatttccgacactaatccctacgggttcacagtttcctggacggca
tcggagaatgcctttgacagctttgtagtaacggtggtggattctgggaagctgctggac
ccccaggaattcacactttcaggaacccagaggaagctggagcttagaggcctcataact
ggtattgggtatgaggtcctggtctctggcttcatccaagggcaccaaaccacgcccttg
agggctgaggctgttacagaggctgaactggaagttgacaaccttctagtttcagatgcc
actccaggtggtttccgtctgtcctggactgctgatgaagggatattcgacagttttgtt
ctcaggatcagagataccaaaaagcaatctgaaccacaagaaataaccctaccttccccc
gaacgtaccagggacataacaggtctcagagaggccactgagtacgaaattgaactctat
ggaataagcggtggaaggcgatcccagccagtcagtaccatagcaacaacagccatgggt
tctccgaaggaaatcacgttctcagacatcactgacaatgcagccaccgtcagctggaag
gcacccactgccccagtggagagcttccggattacctacgtgcccatgacaggaggtgtc
cccgccatggtgttggtggatggaaccgatactgagacacgtttggtgaagctcacccct
ggagtggaataccatgtcagcattattgccataaagggctttgaagaaagtgatcctgtc
tcagggtcactaaccacagctctggatggtccatctggcctacagacagctaacatcaca
gactcagaagccttggccatgtggcagccagccatcgccactgtggacagttatgtcatc
tcctatacaggagagagagtgccagaagttacacgcacagtgtctgggaacacggtggag
tatgaactacaggacctggagcctgccacagagtacacactgaggatctttgcagaaaaa
ggccaccagaagagctctgccgtcaccaccaagttcaccacagacctcgattccccaaga
gacttgactgctactgacgttcaatcagaaactgccctcctcacctggagacctccccgg
gcatcaatcactggttacctcctggtctatgaatctctggacggcacagtcaaggaagtc
attgtgggaccagataccacctcctacagcctggcagacctgagtccctccacccactac
acagtgaggatccaagcattgagtggatccctaaggagcaagctgatccaaaccatcttt
accacaattggactcctgtacccattccccagggactgctctcaagcaatgttgaatggc
gacaccacctctggtctctacaccatctatataaatggtgataagactcaagcactggat
gtctactgtgatatgacctcagatggaggtggatggattgttttcctgagacgcaaaaat
ggacgtgaggacttctatcgaaactggaaggcctatgctgctgggtttggggaccgcaga
gaagaattctggcttggactggataacctaagcaaaatcacagcccaagggcagtacgag
ctccgagtggacctacaagaccatggggagtcagcctttgcagtgtacgacagattcagt
gtgggagacgccaagagtcgctacaagctgaaggtagaaggatacagtggaacggcaggc
gactccatgaactatcacaatggcagatccttctccacctatgacaaggacacagattca
gccatcaccaactgtgctctgtcctacaaaggagctttttggtataaaaactgtcatcgt
gtcaacctgatgggcagatatggggacaataaccacagtcagggtgttaactggttccat
tggaagggccatgagtactcaatccagtttgctgagatgaagctgagacccagcaacttc
cggaatctcgaaggcaggcggaagcgagcataa
DBGET
integrated database retrieval system
