Arvicola amphibius (Eurasian water vole): 119817004
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Entry
119817004 CDS
T08327
Symbol
Coro1a
Name
(RefSeq) coronin-1A isoform X1
KO
K13882
coronin-1A
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04145
Phagosome
aamp05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119817004 (Coro1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
119817004 (Coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119817004 (Coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119817004 (Coro1a)
04147 Exosome [BR:
aamp04147
]
119817004 (Coro1a)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Phagocytosis
Coronins
119817004 (Coro1a)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119817004 (Coro1a)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119817004 (Coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trimer_CC
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR19_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
VPS51_Exo84_N
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
DUF1465
DUF2730
DivIC
DUF7310
YwqH-like
FlaC_arch
Seryl_tRNA_N
DUF4140
Motif
Other DBs
NCBI-GeneID:
119817004
NCBI-ProteinID:
XP_038190071
LinkDB
All DBs
Position
1:complement(128923628..128928625)
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AA seq
464 aa
AA seq
DB search
MDGMSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGG
AFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV
LPLREPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGEAVLTLGPDVHPD
TIYSVDWSRDGGLICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT
GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEI
TSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERKCEPIAMTVPRKSD
LFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLKDGYVPPKSRELRVNRGLDSVRKRA
TPEASGAPSSDTVSRLEEEMRNLQATVQELQKRMDRLEETVQAK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatgagccggcaggtggttcgctccagtaaattccgccacgtgtttggacag
ccagccaaagctgaccagtgctatgaggatgtgcgcgtctcgcagaccacctgggacagc
ggcttctgtgccgtcaaccccaagttcatggctctgatctgtgaggccagtgggggaggg
gccttcctggtgctgcccctaggcaagactggacgagtggacaagaacgtgcccctggtt
tgcggccatactgctcctgtgctagacatcgcctggtgcccacacaatgacaatgtcatt
gccagtggctctgaggactgcacagttatggtgtgggagatccctgacggaggcctggtg
ctgcccctgcgggagcctgttgtcactctggaaggtcacaccaagcgggtgggcatcgtg
gcctggcaccccacagcccagaatgtgctcctcagcgcaggttgtgacaatgtgatcctg
gtgtgggatgtgggcactggggaagccgtgctgacactgggtcccgacgtgcacccggac
acgatctacagtgtggactggagccgggacggcggtctcatctgtacctcctgtcgcgac
aagcgtgttcgcatcattgagcctcggaaaggcactgtggtggctgaaaaggaccgtcct
catgagggaactcggccagtgcatgctgtgtttgtatcagaagggaagatcctaaccacg
ggtttcagtcgcatgagtgagcggcaggtggcgctgtgggacacaaagcacctagaagag
ccgctgtccctgcaggagctggacacaagcagcggagttctgctgcctttttttgaccct
gacaccaacattgtctacctctgtggcaagggtgacagctctatccggtattttgagatc
acttctgaggctccgttcctgcactatctttccatgttcagttccaaggagtcccagcgt
ggtatgggctacatgcccaaacgtggcctggaagtgaataagtgtgagattgccaggttc
tacaagcttcatgagcggaaatgtgagcccatcgccatgacagtacccagaaagtcggac
ctgttccaggaggacctgtatccacccactgcaggaccagaccctgccctcacagctgag
gagtggctgggtggccgggatgctggccccctcctcatctccctcaaggatggctacgtg
cccccaaagagccgggagctgagagtcaacaggggcttggacagcgtccgcaagagagcc
acaccagaggccagtggcgctcccagctcggacactgtgtcgcggctggaggaagagatg
aggaacctgcaggccacggtacaagagctacagaagcgcatggacaggctggaggagact
gttcaggccaagtag
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integrated database retrieval system
