Arvicola amphibius (Eurasian water vole): 119817322
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Entry
119817322 CDS
T08327
Symbol
Exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119817322 (Exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119817322 (Exosc10)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119817322 (Exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
119817322
NCBI-ProteinID:
XP_038190417
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All DBs
Position
6:complement(7764871..7787683)
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AA seq
885 aa
AA seq
DB search
MAPPSPQERQAAPATSATKPDEEMVLPGFPDADSFVKFALGSVVAVTKASGSLPQFGDEY
DFYRSFPAFQAFCDTQGDRLLQCMSRVMQYHGCRSSIKDRRTVTELEDKFDLLVDANDVI
LERVGILLDEASGVNKHQQPVLPAGLQVPKTIVSSWNRKAGEYGKKAKSETFRLLHAKNI
LRPQLRFREKIDNSNTPFLPKIFVKPNARKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPESVLQKPRPQLYRPVEETPCHFVSSLDQLVEL
NEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQ
LADWRIRPLPEEMLTYARDDTHYLLYIYDRMRLELWERSNDQPVQLQVVWQRSRDICLKK
FVKPIFTDESYLELYRKQKKHLNSQQLAAFQLLFSWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSETTAGVKKSGPLPSAE
RLENELFGPHDCSHAPPDNYSITPTDGSVPLQKQPSLFAEGEEETSVDARCLLATAVITI
FSEPSTEENGKTPLTVAQKKAQNIMESFENPFRMFLPSLEHKAHISQAAKFDPSSKIYEI
SNRWKLASQVQKEPKEATTKKAAEQTAARKQAKEESEAAALEQAIPVRQQAALENATKKR
ERATSDLRSTEQKQEKKRLKSSKKPKDPDPPGKDFTPYDYNQSDFRAFAGDSKSKPSSQF
DPNKPAPSGKKCVAAKKCKQSMGNKSMSFLAGKSDRGFRHNWPKR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagtccccaggagcgtcaggctgcgccggccaccagcgcgaccaagcct
gacgaggagatggtgctgcctggcttccccgacgcagacagcttcgtgaaatttgccctt
gggtcagtagtggcggtgaccaaggcatctgggagcctgccacagtttggcgacgagtat
gacttttaccgaagttttcctgccttccaggcattttgtgatacccaaggagacagattg
cttcagtgcatgagtagggtaatgcagtaccatgggtgtcgcagcagcattaaagatcga
aggaccgtgactgaattggaggacaagttcgatttactggttgatgccaacgatgtgatt
ttggagagagtgggtatattactggatgaagcatcaggtgtgaataagcaccagcagcct
gtcctccctgcaggactgcaggtccccaaaacaatcgtgtctagctggaaccggaaggca
ggagaatatgggaaaaaagcaaaatctgagactttccgactgctgcatgcgaaaaacatc
ctccgacctcagctcagatttcgggagaagattgataattccaacacgccctttctccct
aaaatctttgtcaagcccaatgcccggaagcccctccctcaggctctctcaaaagaaaga
cgggaacgtccacaggatcgtcctgaggacctggacgtgccccctgccctggcagatttc
atccatcagcagaggacccagcaggttgaacaggacatgtttgcacatccttatcagtat
gaactcgatcacttcactccgcctgagtcagtgcttcagaagccgcggccacagttgtac
agacctgtggaagagacaccctgccactttgtatcctccctggaccaacttgtggagctc
aacgagaagctcctgggttgtcaggagtttgcagtggatctagagcatcactcatacaga
agcttcctcggactgacctgcctgatgcagatttccacccggacggaagacttcatcatc
gacaccctagagcttcgaagtgacatgtacattctcaacgagagcctcacagacccggcc
atcgttaaggtcttccatggtgctgactctgacatagagtggctacagaaagacttcggg
ctctatgtggtgaacatgtttgacacacaccaggcagcacggcttctcaacctggctcgt
cactcacttgaccatctgctgagactgtactgtggtgtggagtcaaacaagcagtatcag
ctggcagattggaggatacgccctctgccagaggaaatgctgacctacgcccgggatgac
acccattacctgctttacatctatgaccgcatgaggctggagctgtgggagagaagcaac
gaccaacctgtccagttgcaggtggtgtggcagcggagcagggacatatgcctcaagaaa
tttgtcaagcctatctttacggacgagtcctacctcgagctgtatcgaaagcagaagaag
catctgaactcacagcagctggcggcctttcagctgctgttttcctggagggataaaaca
gcccgcagggaggatgagagctacggatatgttctacccaatcacatgatgctaaagata
gccgaggaactgcctaaggaacctcaaggcatcatagcttgctgcaacccggtcccacct
cttgttcggcagcagatcaatgagatgcatcttttaatccaacaggctcgagagatgccc
ctgctcaagtctgaaaccacagctggagtgaagaagagcggaccactgcctagcgccgag
agattggagaatgagctctttggaccccatgactgttcccacgcccctccagataactac
tcgatcaccccaactgatgggtctgtgccacttcagaaacagccgagcctctttgctgag
ggcgaagaagagacctctgtggatgccagatgccttcttgctacagccgtcatcactatc
tttagtgaacctagtactgaggaaaatggaaagactccattgacagtggcacagaaaaaa
gcccagaatataatggagtcctttgaaaatccgtttaggatgttcctgccttctctggaa
cacaaggcccacatctctcaagcagcaaagtttgatccttcttcaaaaatctatgaaatc
agcaaccgctggaagctggccagccaggtccagaaagaacctaaagaagcaaccacgaag
aaggctgctgagcaaacagctgcccggaaacaggcaaaggaggagtctgaggctgctgca
ctggaacaggccatcccggtgcggcaacaggccgcactagaaaatgccactaagaagaga
gagagagccacaagtgacctgaggagcacagaacagaagcaggagaagaaaaggttgaaa
agctccaagaaacccaaggatccagaccccccaggaaaggatttcacaccttacgactac
aaccagtcagacttcagggcctttgctggggacagcaaatccaagccctcctcccagttt
gacccaaataagccggcaccttctggcaagaaatgtgttgcagccaagaaatgtaaacag
tcgatggggaacaaaagcatgtcgtttctggctgggaagtcagacagaggcttccggcac
aactggccaaagagatag
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