Arvicola amphibius (Eurasian water vole): 119817443
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Entry
119817443 CDS
T08327
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp04820
Cytoskeleton in muscle cells
aamp04974
Protein digestion and absorption
aamp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119817443 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119817443 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119817443 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119817443 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119817443 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
119817443 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aamp00535
]
119817443 (Col9a2)
Proteoglycans [BR:
aamp00535
]
Extracellular matrix (ECM) proteoglycans
Others
119817443 (Col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119817443
NCBI-ProteinID:
XP_038190601
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All DBs
Position
6:complement(29641823..29657792)
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AA seq
688 aa
AA seq
DB search
MATTPALRSLVVLLQVLGLALAQIKGPPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKVGP
PGSKGEPGKPGPDGPDGKPGVDGLMGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGTPGPKGDPGPEGPSGPPGPPGKPGQPGTIQGLEGSADLLCPTNCPAG
AKGPQGLQGVKGHPGKRGILGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGVAG
PKGETGPRGYKGMVGSIGAAGPPGEEGPRGPPGRTGEKGNVGSQGARGPQGITGPKGTTG
PPGIDGKDGTPGIPGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPG
ISGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGTKGEQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGQSGEPGPKGQQGVRGEPGYPGPSG
DAGAPGVQGYPGLPGPRGLVGDRGVPGQPGRQGVVGRVASDQHIVDVVLKMIQEQLAEVA
VSAKREALGATGMVGPPGPPGPPGYPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKRG
EKGDQGEMGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGESGRPGRPGPVGLP
GFCEPAACLGASAYASARLTEPGSIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccaccactcccgcgctccgcagcttggtcgttctcctccaggtgctggggctcgcc
ctggctcagatcaaaggtcctccaggagagccgggtcctccagggccaccagggccacca
ggagtgccgggttctgatggcatcgacggtgacaaggggcctccgggaaaagtcggtcct
ccgggatccaaaggagagcctggcaaaccggggccggatgggccggatggaaagcctggc
gtggatggtttaatgggagccaagggagaacctggccccatggggacccctggagtcaag
ggtcagcctgggctcccagggccccctggcctgccgggccctggatttgctggccctcct
ggaccacctggacccgtgggcctccctggtgagattggaaccccaggccccaagggagat
ccaggaccagagggaccatcagggcccccaggacctcctgggaaaccgggtcaaccagga
accatccagggcctggaagggagtgcggatctcctgtgtccaaccaactgtccagctggt
gcgaaaggcccccaggggctgcaaggagtgaaggggcatccaggcaagcgggggattctg
ggcgatcctggtcgccaggggaagccgggccccaagggagatgtgggtgcctctggagag
caaggcatccctggaccaccgggtccccagggcatcaggggctacccaggtgtggcagga
cctaagggagagacgggtcctcgtggatataaaggcatggtgggctccatcggggctgct
gggccaccgggtgaagaaggaccaagggggccaccaggccgaactggtgagaaggggaat
gtggggagccaaggtgcccgaggaccccaggggataacaggcccaaagggaacaacaggt
cctccaggcattgacggcaaggacgggaccccgggcatacccggcatgaagggcagcgca
ggtcaggtggggcggccaggaagcccaggccaccagggcctagcgggtgtgccgggtcag
cctgggacaaaaggaggccctggagacaagggtgaaccaggccagcagggcttccctgga
atctccggtcctcctgggaaagaaggggagccagggcctcgaggggaaatcggtccacag
ggcataatgggacagaagggtgatcagggtgaaaggggaccagtagggcagccaggccct
caaggacgacagggcaccaagggagagcagggccccccaggaattccaggaccccaaggc
ttgccaggcatcaaaggagataagggttccccagggaagacagggccccgaggtggagtg
ggtgacccgggggtggccggcctcccgggtgagaaaggggagaagggccagtcgggagag
ccgggacccaagggacagcaaggagtccgtggagagccaggataccctggccccagcggg
gatgcgggcgccccaggagtgcagggttatcccgggcttcccggaccccgaggactggtg
ggagatcgaggcgtgccaggacaacctgggagacaaggagtagtgggcagagttgccagt
gaccagcatatcgtggacgtggtactgaaaatgattcaagagcaactggcagaagtggct
gtgagtgccaagcgggaagccctgggtgcaaccggaatggtgggtcctccaggacctcct
gggccccctggatatccaggcaaacagggaccccatgggcatcctggtccccgaggcatt
cctggcatcgtgggagcagtgggtcagattggcaacactgggcccaagggaaagcgtgga
gagaaaggagaccaaggagaaatgggacgtgggcaccccgggatgcccgggcccccaggg
atcccaggtcttcctggccggcctggccaggcaatcaatggcaaagatggagacagagga
tccccgggggctccaggagagtctggccgacctggccggccaggcccagtggggctgcct
ggtttctgtgagcctgccgcctgcctgggggcttcagcctacgcctctgctcgtctcaca
gagcctgggtccatcaaggggccatga
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