Arvicola amphibius (Eurasian water vole): 119817579
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Entry
119817579 CDS
T08327
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp03015
mRNA surveillance pathway
aamp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119817579
09122 Translation
03013 Nucleocytoplasmic transport
119817579
03015 mRNA surveillance pathway
119817579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119817579
03041 Spliceosome [BR:
aamp03041
]
119817579
03009 Ribosome biogenesis [BR:
aamp03009
]
119817579
03012 Translation factors [BR:
aamp03012
]
119817579
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119817579
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119817579
mRNA cycle factors
Stress granule specific factors
119817579
Spliceosome [BR:
aamp03041
]
Complex C
Other components
EJC/TREX
119817579
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
90S particles
Helicases
119817579
Translation factors [BR:
aamp03012
]
Eukaryotic type
Initiation factors
eIF-4
119817579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
TniB
Motif
Other DBs
NCBI-GeneID:
119817579
NCBI-ProteinID:
XP_038190824
LinkDB
All DBs
Position
6:34185740..34186966
Genome browser
AA seq
405 aa
AA seq
DB search
MAMSASGRKWLLKEEDVNKVEFETSEEVDVTPTFDTVGLREDLLRGIYAYGFEKPSAIQQ
RALKQIIKGRDVIAQSQSGTGKTATFSISVLQGLDIQVRETQALILAPTRELAVQIQKGL
LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL
DEADEMLNRGFKEQIYDVYRFLPPATQVVLVSATLPHEILEMTNKFMTDPICILVKRDEL
TLEGIKQFLVAVEREEWKFDTLCDLYDTLTVTQAVIFCNTKRKVDWLTEKMREANFTVSS
MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG
RSGRYGRKGVAINFVKNDDIRILRDIEQYYSIQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcagcctccgggcggaagtggttgctcaaagaggaggacgtgaacaaagtg
gagttcgagaccagcgaggaggtggacgtgacccccacgttcgacaccgtgggcctgcgg
gaggacctactgcgcggcatctacgcctacggttttgagaagccttcagcaatccagcag
cgcgctctcaagcagataattaaggggagagatgtcatagcccagtctcagtctggcacc
ggcaagacggccaccttcagcatttcagtcctccagggcttggatatccaggttcgagaa
acccaagctttgatcttggctccaacaagagagttagctgtacagattcagaagggtttg
ctggctctgggggactacatgaatgtacagtgccacgcctgcattgggggcaccaatgtt
ggggaggacatccgcaagctggactatgggcaacatgttgtggcaggcaccccgggacgc
gtctttgatatgattcgccgtagaagtttaaggacacgggctatcaagatgttggttttg
gatgaggctgatgaaatgttgaacagaggtttcaaggagcagatctacgatgtgtacagg
ttcctgccgccggccacacaggtggttctcgtcagtgccacattgcctcatgagatcctg
gagatgaccaacaagtttatgaccgaccccatctgcatcttggtgaagcgtgatgaattg
actctggaaggcatcaagcagttcttggtggcggtggaaagagaggagtggaaatttgac
actctgtgtgacctctacgacacgctgaccgtcacccaggctgtcatcttctgcaacacc
aagaggaaggttgactggctgacagagaagatgagagaagccaacttcactgtgtcatcc
atgcacggggacatgccccagaaggagcgcgagtccatcatgaaggagttccgctcaggt
gccagccgagtgctcatttctacagatgtctgggctcgcggcctggatgtccctcaggtg
tccctcatcattaactacgacctgcccaacaacagagaactgtacattcacaggatcggg
agatcggggcgatacggccgcaaaggtgtggctatcaattttgtgaagaatgatgacatc
cgcatcctcagggacatagaacagtactactccatccagatagacgagatgcccatgaac
gtggctgacctgatctga
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integrated database retrieval system
