Arvicola amphibius (Eurasian water vole): 119817716
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Entry
119817716 CDS
T08327
Symbol
Copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119817716 (Copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119817716 (Copb1)
Membrane trafficking [BR:
aamp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119817716 (Copb1)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119817716 (Copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
CRAL_TRIO_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
119817716
NCBI-ProteinID:
XP_038191023
LinkDB
All DBs
Position
1:complement(116122224..116161823)
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AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagctgagaacgtgtgctatacgttaattaacgtgcccatggattcagaaccc
ccttctgaaatcagcttaaaaaatgatctggagaaaggtgatgtgaagtccaagactgaa
gctttgaagaaagtaatcatcatgattctgaatggtgagaagctccctggactcctgatg
actatcatccgttttgtgctgcctcttcaggaccacaccatcaaaaagctgcttctcgtg
ttctgggagattgttcctaaaacaactccagatgggagacttttacatgaaatgattctt
gtatgtgacgcatatagaaaggatcttcagcatcctaatgagtttatccgcggatctact
cttcgtttcctttgcaaattgaaggaagcagagttgctcgaacctttaatgcccgctatc
cgtgcttgtttggaacatcgtcacagttatgttaggagaaacgctgttttggccatctat
accatctacagaaattttgaacatcttatacctgatgctcctgagctgatccatgatttt
ctggtaaatgagaaggatgcaagctgcaaaagaaatgcatttatgatgttaattcatgca
gatcaggatcgagctttggattatttaagtacatgtattgatcaagttcagacatttgga
gacattctacagttggttattgtcgaactaatatataaggtctgtcatgctaatccatca
gaaagggcccgtttcattcgctgtatctataacttactgcagtcatctagccctgctgta
aaatacgaagctgctggcacactggtgacactgtcaagtgcgccaactgcaataaaggct
gctgctcagtgttacattgatttaattattaaggagagtgataataatgtaaagctcata
gttctggaccgattggtagaattaaaagagcatcctgctcatgaacgagtcctccaggat
cttgtcatggacatcctcagagttctgagtacaccagacttagaagtgcgtaagaaaacg
ctgcagttggcactggatcttgtgtcctctaggaatgttgaagagttggtgattgtcttg
aagaaggaagtaattaaaacaaataatgtttctgagcatgaagacactgacaaataccga
cagctccttgtgcggactctgcattcctgctctgtccgctttccagacatggctgcaaat
gttattcctgtgctcatggagtttctcagtgatagtaatgaagcagcagctgctgatgtc
ttggagtttgttcgtgaagctattcagcgctttgacaacctgagaatgctgattgttgag
aagatgctggaagtcttccatgccattaagtctgtcaagatttatcgaggagcattgtgg
atcctaggagaatattgtagtacaaaggaagacattcagagtgtgatgactgaggtccgc
aggtcccttggggagatcccaattgtagagtcagaaataaagaaagaagctggtgagtta
aagcctgaagaggaaattactgttgggccagttcagaaactggttacagagatgggcacc
tatgcaacccagagtgccctcagcagctcgagacctaccaagaaagaagaagacagacca
cccttgagagggttcctcctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgcattacgctatgtagcgttggttcaggagaagaaaaagcaaaactct
tttgttgctgaagctatgttgctcatggcaactattcttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagaccgaatttccctgtgcctcaaggtctta
tctgaatgttcacctttaatgaatgacatttttaataaggaatgcaggcagtctctttcc
caaatgttatctgccaaacttgaagaagaaaaactatcccaaaagaaagaatctgagaag
aggaatgtaacagtacaacctgatgaccccatttccttcatgcaactaactgccaagaat
gaaatgaactgcaaggaagatcagtttcagctgagcttgttggccgcaatgggtaataca
caaaggaaagaggccgcagatcccctagcatccaagcttaataaggtcacccagttgaca
ggtttctcggatcctgtgtatgcagaagcttatgttcatgtcaatcagtatgatattgtc
ctggatgttcttgttgtaaaccaaaccagtgatactttgcagaactgcacgttagaatta
gctactctaggggatctgaaacttgtggaaaaaccttctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtcaaggtagcatcaacagaaaatggaataattttt
ggcaatatagtttatgatgtgtctggagcagcaagtgacaggaactgtgtggtcctcagt
gacatccacattgacatcatggactatatccagcctgcaacttgcactgatgccgagttc
cgtcagatgtgggccgaatttgaatgggaaaataaagtgacagttaacaccaatatgatt
gatttaaatgactatttacagcatatcttaaagtcaaccaacatgaagtgcctgactcca
gagaaggccctttctggctactgtggctttatggcagccaacctgtacgctcgttctata
tttggggaggatgcacttgcaaatgtcagcattgagaagccagttcaccagggaccagat
gctgctgttactggtcatattagaattcgtgcaaagagtcagggaatggccttgagcctt
ggagataaaatcaacctgtctcaaaagaagactagtctataa
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