Arvicola amphibius (Eurasian water vole): 119817735
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Entry
119817735 CDS
T08327
Symbol
Tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119817735 (Tdp2)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
119817735 (Tdp2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
UBA_8
UBA_4
Diphtheria_R
Motif
Other DBs
NCBI-GeneID:
119817735
NCBI-ProteinID:
XP_038191058
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All DBs
Position
6:125242829..125257200
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AA seq
369 aa
AA seq
DB search
MASGNGSDAREPAEPAAAPAAAETEEEIDQRVKRRRLQCMGFALVAKCETTMAHTFLSEN
DWQMDKALSAYFEPPENDPAWPRQPPTSFQSETYVDLTNEDSNETTILETSPSEPPLEDS
SIISFITWNIDGLDGSNLPERARGVCSYLALYSPDVVFLQEVIPSYCAYLKKRASGYKII
TGNEEGYFTAILLKKGRVKFKSQEIVPFPNTKMMRNLLCVNVSVGGNEFCLMTSHLESTR
EHSAERMSQLKTVFQKMQEAPDSTTVLFAGDTNLRDHEVIKCGGLPANVFDAWEFLGKPK
HCQYTWDTRINTNLRIPAAYKHRFDRIFFRAEEGRLIPQSLDLVGLEKLDCGRFPSDHWG
LLCNLNVVL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgggaacggctcggatgcgcgggagccggcagagccggcggcggcgcccgca
gcagcagaaacagaggaggagattgaccagcgggtgaagaggcgacggcttcagtgcatg
gggtttgcgttggtggcgaaatgcgaaaccacgatggcccacaccttcctgtcggagaac
gactggcagatggacaaagcgctgagcgcctacttcgaaccgccagagaacgaccccgca
tggcctcgccagcctccgacgtccttccaatccgagacctatgttgatctaaccaacgag
gattcaaatgaaaccaccatcttagaaaccagtccatctgaaccccctctagaagacagc
agcattatctctttcattacctggaatattgacggattagatggaagcaatctgccagag
agggctcgaggggtgtgttcttacctagctttgtacagtcccgatgtagtatttctacag
gaagttattccttcatattgtgcctacctaaagaagagagcaagcggctacaaaattatc
acaggtaatgaagaaggatatttcacagctatactgttgaagaaaggaagagtgaaattt
aaaagtcaagagattgttccgtttccaaatactaagatgatgagaaaccttctgtgtgtg
aacgtgagtgtgggtggaaatgaattctgccttatgacgtcccatttggagagcaccaga
gaacattctgcagaacgaatgagtcaattaaaaacggtttttcagaaaatgcaagaagct
ccagattcaactactgttctatttgcaggagatacaaatttaagagatcatgaagttatc
aaatgtggtggtttacctgccaatgtttttgatgcctgggaatttttgggcaaacctaag
cattgccagtatacatgggatacgagaataaatactaatctcaggattcctgctgcttat
aagcatcgctttgatcgaatatttttcagagcagaggagggccgcctcattccccaaagt
ttggaccttgttgggttggaaaaactggactgtggtagatttcctagtgatcactggggt
ctcctgtgcaacttgaatgtagtattgtga
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integrated database retrieval system
