Arvicola amphibius (Eurasian water vole): 119817819
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Entry
119817819 CDS
T08327
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119817819 (Zc3h12a)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119817819 (Zc3h12a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
Frey
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
119817819
NCBI-ProteinID:
XP_038191169
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All DBs
Position
6:27187529..27196516
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AA seq
595 aa
AA seq
DB search
MSDPCGKKPVQEASPTMSLWDLEDSHSCRGRPQPVQDPEAKETSAELQMKVDFFRKLGYS
SSEIHSVLQKLGVQADTNTVLGELVKHGSATERECQASTDPCPQLPLVPRGGSTPKPSCL
EPSLPEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPS
WRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVVV
SNDTYRDLQGERQEWKRFIEERLLMYSFVSDKFMPPDDPLGRHGPSLDNFLRKKSLPSEH
RKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPVKDKSGQRPSPA
SQPRSVSPEAEQSNLDGKKLGARSSPGPHQEGSTQTFSTAGRSLPVSGGSFGPTEWLPHT
PDSLPYTSQECLDSGIGSLESQMSELWGVRGGSPGESGSTRGPYAGYHTYGSELPAAPAF
APFRQPIGAGHFSVPTEYVPQLPTFPAREYWSEPYPLPSPTQVLHEPQRPSQGASGGPWG
RVSERAKERAGVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHLSK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccctgtggaaagaaacctgtccaagaagccagccccaccatgagtctgtgg
gatcttgaggacagccacagctgccggggtcgccctcagccagtccaggaccctgaggct
aaagaaacctctgctgagttgcagatgaaggtcgacttctttcggaagctgggctactca
tcctctgagatccacagtgttctgcagaagttgggggtccaagcggataccaacacggtg
ctgggggagctagtgaagcatggctcagctaccgagcgggagtgccaggcctccacagac
ccctgcccccagctccctctggtgcccaggggcggaagcacccccaaaccttcctgtcta
gaaccttcactcccagaggaggacaaagagggcagtgatctgaggcctgtggtcatcgat
ggaagcaatgtggccatgagtcacgggaacaaggaagtcttctcttgtcggggcattctg
ctggctgtgaactggtttctggagcggggccacacagacatcacagtgtttgtaccatca
tggaggaaggaacagcctcggccagatgtgcccatcacagaccagcacattctgcgggaa
ctagagaaaaagaagatcctggtgttcacaccgtccaggcgtgtaggtggcaagcgtgtg
gtgtgctacgatgaccgcttcattgtgaagctggcctatgaatccgacggggtggtagtc
tccaatgacacataccgggacctccaaggcgagcggcaggagtggaagcgcttcattgag
gagcggctgctcatgtactctttcgtcagtgacaagttcatgccccctgatgaccctttg
ggacggcatgggcctagcctagacaacttcttgcgtaagaagtcactgccttctgaacac
aggaagcagccatgtccttatgggaggaagtgtacctatggaatcaagtgccggttcttc
caccctgagcggccaagccgcccccagcgctccgtggctgatgagctccgcgctaatgcc
ctcctctcaccccccaggactccagtgaaggacaaaagtggccagaggccttcccctgcc
tctcagccccgctctgtgtctccagaagctgagcagagcaacctagatgggaaaaaactg
ggggccagatcatccccaggcccccaccaagaaggctccacacagacctttagtacagct
ggcaggagcctccctgttagtgggggcagctttgggcccaccgagtggctcccacacacc
ccggactcactgccatacacctcccaggagtgccttgattcaggcattggctccctggag
agccagatgtcggaattatggggggtgcgaggaggcagccctggggagtcgggctcaact
cggggtccttatgctggttatcacacctatgggtctgagctcccagcagcacctgccttt
gctccctttagacagcccattggtgctggccacttcagtgtccccaccgaatatgtgccc
cagctgcccacctttccagccagagagtactggtctgagccgtaccctttgccctcaccc
acccaagtccttcatgagccccagaggcccagccaaggggctagtgggggcccctggggc
agggtgagcgaaagggccaaagaaagggctggtgtgtacaccaagttgtgtggcgtcttc
cccccacacctggtagaagctgtgatggggcgcttcccacagctcctggacccccagcag
ctggctgccgagatcctttcttacaagtcccagcacctcagtaagtaa
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