Arvicola amphibius (Eurasian water vole): 119817896
Help
Entry
119817896 CDS
T08327
Symbol
Ttc39a
Name
(RefSeq) tetratricopeptide repeat protein 39A isoform X1
KO
K24943
tetratricopeptide repeat protein 39
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119817896 (Ttc39a)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
119817896 (Ttc39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
TPR_16
TPR_2
TPR_12
TPR_14
TPR_19
TPR_6
TPR_1
TPR_Slam
TPR_MalT
SidE_PDE
ARM_TT21
TPR_7
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
119817896
NCBI-ProteinID:
XP_038191277
LinkDB
All DBs
Position
6:complement(38656165..38697447)
Genome browser
AA seq
591 aa
AA seq
DB search
MNECPRLTAEARLSLLRWRGSAAGPRELRSPVSSLHEALDQCMTALDLFLTNQFSEALSY
LKPRTKESMYHSLTYATILEMQAMMTFDPQDILLASNMMKEAQSLCQRHRRKSSVSDSFS
NLVHRPTMDQFTEEEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKEL
DSLVQSSQYCKGESHSHFEGGVKLGVGAFNLTLSMLPTRILRLLEFVGFSGNKDYGLLQL
EEGATGHSFRAVLCVMLLLCYHTFLTFVLGTGNVNIEEAEKLLKPYLNRYPKGAIFLFFA
GRIEAIKGNIDAAIRRFEECCEAQQHWKQFHHMCYWELMWCFTYKGQWKMAYFYADLLSK
ENSWSKATYIYMKAAYLSMFGKEDYKPFGDDEVALFRAVPGLKLKIAGKSLPTEKFAIRK
SRRYLSPNPISLPIPALEMMYIWNGYAVIGKQPKLTDEMLEVITKAEEMLAMGPENEYSA
DDDCLVKLLKGLCLRYLGRIQEAEENFRSISASEKKIKYDHYLIPNALLELALLFMEQGR
NEEAIKLLDSAKQNYKNYSMESRTHFRIQAATLQARSSLDGNSSAVSSVSL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatgtccacgcctgactgcagaagctagactttctctgctcagatggcggggc
agtgcggctggaccgcgagagctcaggtctcctgtgagcagcctccatgaggccctggac
cagtgcatgacagccctggacctcttcctcaccaaccagttctcagaagcactcagctac
ctcaaacccagaaccaaggagagcatgtaccactcactgacgtatgccaccatcctggag
atgcaggccatgatgaccttcgacccccaggacatcctgcttgctagcaacatgatgaag
gaagcacagtcgctgtgtcagaggcatcggaggaagtcttctgtgtcggactctttcagc
aacctggtacaccgtcccaccatggaccagttcacagaagaggagatccacgcagaggtc
tgctatgcagagtgcctgctgcagagagcggccctgaccttcctgcaggacgagaacatg
gtgagcttcatcaagggtggcatcaaagttcgaaacagctaccagacctacaaggagctg
gatagcctcgttcagtcctcgcagtactgcaagggagagagccacagtcactttgaagga
ggggtgaagcttggtgtaggagccttcaacctgacactgtccatgcttcccaccaggatc
ctgaggctgctcgagttcgtcgggttttcaggaaacaaggactacgggctgctgcagttg
gaggagggcgcgacagggcacagcttccgcgcagtgctgtgtgtcatgctcctgctgtgt
taccacaccttcctcaccttcgtgctcggtactggaaatgtcaacatcgaggaagcagag
aagctgttgaagccctacctgaaccgataccctaagggtgccatcttcctgttctttgcc
gggcggattgaagctatcaaaggaaatattgacgctgccatccggcggttcgaagaatgc
tgcgaggcccagcagcattggaagcaattccaccacatgtgttactgggagctcatgtgg
tgcttcacctacaagggtcagtggaagatggcctacttctacgctgacctgctgagcaag
gagaactcctggtccaaggccacctacatctacatgaaggctgcctacctcagcatgttt
gggaaggaggactacaagccattcggggatgacgaagtggcgttgttcagggctgtgcca
ggcttgaagctcaagattgctgggaaatctctacccacagagaagtttgccatccggaag
tccagacgctacctctctcccaaccccatctcgttgccgatccctgctctggaaatgatg
tacatctggaacggctacgctgtgattgggaagcagccgaaactcactgacgagatgctc
gaggtcatcaccaaggctgaagagatgctggcaatgggcccagagaatgagtactcagca
gacgacgactgcctggtcaaactgctcaaaggcctgtgcctgagatacctgggccgcatc
caggaggcagaggaaaacttcaggagcatctctgccagtgaaaagaagattaaatatgac
cactacttgattccaaatgccctgctggagttggccctgctgttcatggagcaaggcaga
aacgaagaggccatcaaactccttgattctgccaaacagaactacaagaactactccatg
gagtcaaggacacacttccgaatccaggcggccacactccaggccaggtcttccctagat
ggcaacagctctgcggtgtcatcggtgtccttgtag
DBGET
integrated database retrieval system
