Arvicola amphibius (Eurasian water vole): 119818497
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Entry
119818497 CDS
T08327
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119818497 (Gapvd1)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
119818497 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
119818497
NCBI-ProteinID:
XP_038191858
LinkDB
All DBs
Position
7:complement(52645678..52722125)
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AA seq
1458 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDENYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLTERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGTEEGD
PRTKNSLGKFDKSCVAAFLDVVIGGRAVETPPMNSVNLLEGLSRTVVYISYSQLITLVNF
MKSVMSGDELKEDRMALDSLLASLPQAKPGKSSSLDVTPYSTPQMSPAATPANKKNRLPI
ATRSRSRSNMLMDLHMDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNVDEDRLQEIAGAAAENVLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDDIAHGAHQLTSPPSQSESLLAMFDPLSSHDGASAV
VRPKVHYARPSHPPPDPPILEGAVGGNEARLPTFGSHILTAAEMEAFKQRHSYPERLVRS
RSSDVVSSVRRPMSDPSCNRRSGNDELPPAAATGATSLVAAPHSSSSSPSKDSSRGEAEE
RKDSDDERSDRSRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDEPSPRL
SAQTQVAEDILDKYRNAIKRTSPSEGAMANDESAEVMGDGESAQDSPRDEALQNISADDL
PDSASQAAHPQDAAFSYRDVKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEIVC
FLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLTRC
RQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADD
KTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILR
DQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRM
CSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEESYW
WMQFTAAVEFIKTIDDRK
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatatccacactctggcccaccacctcaaacaggagcgcttgtacgtg
agctctgagaaacagctcattcagaggctaaatgcagatgtgctgaagacagctgaaaag
ctgtatcgaactgcgtggattgcaaagcaacagaggattaatttggatcggcttattata
accagtgctgaagcttcccctgctgagtgttgccagcatgccaagattttggaagataca
cagtttgttgatggatataagcaactgggatttcaggaaacagcttatggagaattcttg
agtcggttaagagaaaatcctcgtcttattgcctcctctttggttgctggagaaaaactc
aatcaagagaacacacaaagcgttatctacacagtttttacctccttgtatggcaactgt
attatgcaagaagatgaaaactacctccttcaggttttacgatacttgattgaatttgaa
ctgaaagaaagtgacaaccccaggcggcttttgaggagaggaacttgtgccttcagcatc
ttatttaaactgttttctgaaggactgttttctgccaaactttttcttacggctacttta
cacgagcccatcatgcagctccttgtggaagatgaagaccatctggaaacggaccctaac
aagctaaccgagaggttctccccagcgcagcaggaaaagctctttggagagaaaggctca
gatagattcaggcaaaaggttcaagaaatggtggattccaatgaggccaaactggtggct
ttagtgaacaaatttattggttatctcaaacagaacacttactgctttccacatagtctg
aggtggattgtgtcacagatgtacaaaactctctcttgtgtagacagactggaggttggg
gaagtcagagccatgtgcaccgatcttctgttggcttgcttcatttgtcccgcagttgtc
aatccagagcagtatggaataatatctgatgctcctatcaatgaggtggcgagatttaac
ctgatgcaggttggccgccttctgcagcagttagcgatgactggcactgaagaaggagat
cctcggactaaaaatagccttggaaaatttgacaaaagctgtgtcgctgctttccttgat
gtcgtaattgggggccgtgcagtggagactccaccgatgaactccgttaatcttctggaa
ggcttgagcagaactgtggtttatatcagttacagtcagctcattactctggtgaacttt
atgaaaagtgtgatgtctggagatgagctgaaggaagatagaatggctcttgacagcttg
ttggcaagcctgccccaggctaagccagggaagagcagcagtttagacgtcaccccctac
agcactcctcagatgtctccagcagccaccccagccaacaaaaagaaccggttacctata
gcaactcggagcagaagccgaagtaatatgctaatggacttacatatggaccatgaaggg
tcatctcaagaaaccatccaggaggtacagccagaagaggtgctggtcatttccttaggg
acaggtccccaacttactccagggatgatgtcagaaaatgaggtcctcaacatgcagctc
tcagatggaggacaaggagatgtccctgttgatgaaaacaaactccacggtaaacctgac
aaaaccttgcgcttttccctctgcagtgataatctggaaggcatatctgaaggcccttct
aatcgctccaattcagtatcttctcttgacctggaaggagagtctgtgtctgaacttggg
gctggaccttctgggagtaatggagtagaagccctgcagctgctagaacacgagcaagct
acaacacaagataatcttgatgataaactgaggaagtttgagattcgtgacatgatggga
ctaacagatgatagggacatatcagagacagtgagtgagacctggagcaccgatgtcctg
ggaagtgactttgacccgaacgtcgatgaagatcgtttgcaagagattgcaggtgcagca
gcagagaatgtgttaggcagtttgctgtgcctcccaggttcagggtcagttctccttgac
ccttgcactggctctaccatatcagagaccacaagtgaagcttggagtgtagaggtattg
ccaagtgactcagaggctccagacttaaagcaggaggagcgactccaagagctggagagc
tgttctggactgggcagcacgtctgatgatacggatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgttgtgtccggtataagtgctacatcagaggatattcccaat
aagattgaagacctgaggtctgagtgcagctctgattttgggggtaaagattctgtaact
agtccagacatggatgacatagcccatggtgcccaccagctgacctctcctccctcgcag
tcagagtctctgcttgccatgtttgatccactgtcttcacatgatggggcctctgctgtg
gtaaggccgaaggttcactatgcccgaccctcgcacccacccccggatcctccaatcctg
gaaggtgcagtgggagggaatgaggccaggctgcccacctttggttctcacattttaacc
gcagctgaaatggaggcattcaagcagaggcattcctaccccgagaggctggttcgcagc
aggagctctgacgtagtgtcttctgtgcggcggcctatgagtgaccccagttgcaaccgc
cgttctgggaatgacgagctccctccagctgcagccaccggtgctacttctttggtggct
gcacctcattcgtcatcttcttctccgagtaaggactcttcaagaggagaggctgaagag
cgcaaggatagtgatgatgagagatcagacaggagcaggccttggtggagaaaacgcttc
gtgtcagctatgcctaaagctcctataccatttagaaagaaagaaaaacaagaaaaagac
aaagatgatctggggcctgacagattctcaacactcacagatgagcccagccctaggctc
agtgcacagactcaggttgctgaagatattctggacaaatatcggaatgccattaaacgg
accagccccagtgaaggagcaatggccaatgacgagagtgcagaggtcatgggtgatggt
gaaagtgctcaggactctccccgggatgaagcgctgcagaacatctccgccgacgacctc
ccagactcagccagccaagcagcccacccccaggatgctgctttctcttacagagatgta
aaaaagaagctgaggcttgctctttgctctgcggactcggtggcctttccagtgctaacc
cactcaacaaggaatggactgcctgaccacacagacccagaagacaatgaaattgtatgc
ttcttaaaagttcaaatagctgaagcaattaatttacaagataagaacttaatggctcaa
cttcaagaaacaatgcgttgtgtgtgccgctttgacaataggacttgtaggaagctgctg
gcatccattgctgaagactacaggaaaagagccccatatattgcttatctcacccgctgt
cgacaaggactgcagaccacacaggctcacttggaaaggctcttgcaaagagttttgcgg
gacaaagaggtagccaatcggtattttaccactgtatgtgtacggttactgcttgagagc
aaagaaaagaagatcagggagttcattcaagactttcagaaacttactgccgctgacgat
aaaactgctcaagtggaggacttcctgcagtttctgtatggtgcaatggctcaggatgtc
atatggcagaacgccagtgaggagcagctgcaggatgcccagctggccatcgagcggagt
gtgatgaatcggatcttcaagcttgctttctaccctaaccaggacggggacatactccgt
gaccaggttctgcatgaacacatccagagactgtctaaagtggtgactgccaaccataga
gccctgcagattccagaggtttatctgcgtgaggccccgtggccatctgcacagtcagag
atcaggacaataagtgcttacaagactccgcgggacaaagtgcagtgcatcctgaggatg
tgttccaccatcatgaacctccttagtctggccaacgaggactctgtccctggggcagat
gactttgtccctgtgctggtgttcgtgctgataaaggccaacccgccctgcctgctgtcc
acggtacagtacatcagcagcttctacgccagctgtctgtctggagaggagtcctactgg
tggatgcagttcacagccgccgtggagttcattaaaaccatcgacgacaggaaatga
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