Arvicola amphibius (Eurasian water vole): 119818557
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Entry
119818557 CDS
T08327
Symbol
Ttc6
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119818557 (Ttc6)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
119818557 (Ttc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_16
TPR_9
TPR_12
TPR_14
TPR_19
ARM_TT21_N
TPR_CcmH_CycH
TPR_6
TPR_BSK1_C
ANAPC3
COPI_C
ARM_TT21_C
ChAPs
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
119818557
NCBI-ProteinID:
XP_038191990
LinkDB
All DBs
Position
7:complement(117354065..117518179)
Genome browser
AA seq
1854 aa
AA seq
DB search
MSTIPKHFGLTAREESYMFKELQKIRQESKKGYHQFKQKLADRPPFGASSEDDLEDDQDQ
EARPRSARAKGKVSWAAKPSSPSPRVQSPERPAAADLQGAPQSTRRAPEKPVPFSPXDFY
LRSSAFLRHGPLKXTPVIARQAGTARPALLLRPRSRPKRRHPKSRASGLSKRVFPPXSPR
TSPVLGLVRTCYRHASSLSSLGSEFDDSGRLRRMRIHTHYLREGTGGSRWVRNVREGSLT
SQGSWPPQATRFFPTSIEEIIASLQSEAQLASDQTIKELIQSILGQNYDLTMEGISLMEQ
KYFRQTPEIKEEKESQENLKERPVTQSVHEELPEAVSSIFQIEQEDLLDWGAIGEENLAF
KSQEALEIMPLEDFSKPSEAGRPSVDVKSSRRSTIKVRSSELLQIRGREVKRSQKSKPVV
KSLKPRKTVRSQENKKLINKIPQANPISHLHDLCATVPDAELPVDLHLASRVYHTSNRTG
HKAMLGLLGSSLLGDCCLDEQRDRILYGIPVEKQKYGSVPPVLPEEFPELVQITQWQAHQ
PDLQLSGEEVSAYPGASKMFWNLSAPKFAIPESTMRELLYPKYESAQTSKILTEKISESK
ESVVILDTYTRRSFKSLIIKKSASYENIQKYSSAPYTRLKRSNSTVELQKEGTPPPFIVK
DDIDSNLKQLLFQKRKELERQLAKQRAIFDSSIKGSLEAMNESDSLKYLSFSLVEASRKA
GISYIVYPRKKKKLLRKGMKFQKLGLVYEQLSKPPRKLKRSTSHGVLPEQKKFFLKVPLY
ERQIRSPSVPVVLNFDQFVQSKGGIPENTDPRTWAIEIFVKDKPQKTPAAATYVQKDVPE
PVIDLPKLELSDHIKCDLPPEVIQYYESEVERLTQEIRNEKRIPVFAYCRRGAIYRKLGK
LQSAMNDLQETIFLEPLFLNAYWHRHFIYLFQDKINDALDDLNFINKYNKNHAEAYLSKA
EIFREKKEITLAILNYSQAIKCRPKDADLYFKRGEMYEKTNRVLAIDDYSKCIYHNPKRT
DALMKRAVYYFENENWIGTIHDFTALLKLEPQNSYARTNRGRAYFKRSLYKQATQDFSVA
IHLDPNNWLALYYRACVFRKTNPLRALQDYSVSVLINDGYDNLNCFLHRGVLYAQLKLWM
LAICDFETVISLERTATLAYVNIGLLYLLHLDNYTEAFWRFSEAIRVDPLYIQSYICRAE
TYYKLHKLKKAVYELSRAIHLQPDAIQLYIIRGQYLLMMKCYDLAKFTIYQVAEMNKGVI
ELTPIQQALIYSFCENHDKAINVLEGVTVNRPEISTFALLAKAQMKAKKIKEAVRIFKKA
LEMFSSSDKGPNATTVLAECLYNLGLCYMEEGNLQMAFDSFTKAVKANPDFAEAFYHRGL
CKVKLNKDNSILDFNRAITLNPKHYQAYLSRVAYYGLKGRYSKAIMNCNEAIRLYPESVR
AYICRGVLKYYNRSYKLAITDLTTAVNMDKNSYTAFYNRALCYTKIKELEMALRDYGIVL
LLDTGERIALNTFINRGLIYTQLKQYGFALEDFKEAALISQTSVSLFQATAMCHHRIKEF
EGAVDFFTRAVKINTRFLDAYIGRGNSYMEYGQDDALIQAQKDFLKALHIDPSCLKARIS
LGYNLQAQGKFQKAWNHFTIAIEAEPKSSLAYEGRAVICLQMSNNFAAMQDINVAIKINT
TAEFLTNRGVIHEFMGQQQNAMTDYQAAISLDPKYWLAYFNAGNIYFRHRQLSQASDYFS
KALEFNPENEYALMNRAVTNMILKKYEEAEKDFSHAVDLCPHWAALYFNRASFYFCLKQY
EQAEEDLSIGLSLKPDEGAMYNLRSQVRGKMGFTEEAMSDYNRALDLEECPPAM
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatcccgaagcacttcggactgacagcccgagaagaatcgtatatgtttaaa
gagcttcagaagattcgccaggaatccaaaaaggggtatcaccagttcaagcagaagttg
gctgacaggccgccttttggtgcaagttctgaggatgacctcgaagatgaccaggaccag
gaggctcgcccgcgcagtgccagagcaaagggaaaagtgtcctgggctgccaagccatcc
tcgccgtcgcctagggtgcagagcccagagcgccccgccgcggccgacctgcagggggcg
ccgcagagcacgcggcgcgctcccgagaagcccgtacccttcagcccgncggacttctac
ctgcggagctcggcgttcctgcggcacggtcccctcaaangcacccccgtcatcgcccgg
caggcgggcaccgccaggcccgcgctccttctgcggccgcgatcgcgtcccaagaggcgg
catcccaagagccgagcgagcgggttgtctaagcgcgtgttccccccctgatcccctcgc
acgagcccggtgctcggcttggttcgcacctgctaccgacatgccagctccttgtccagc
ctgggcagcgagttcgacgatagcggacggctgcgcaggatgcggatccacacccactac
ctgcgcgagggcacgggcggttctcggtgggtcagaaacgtgcgcgaagggagcttgacc
agccaggggtcctggcctccgcaggcgactcgctttttccccacgagcatagaggagatc
atcgcctctctgcagtccgaggcccagctggcttcagaccagaccatcaaggagctcatc
cagagcatcctgggccagaactacgacctcacaatggaaggtatttctttgatggaacaa
aagtacttcagacaaacacctgagataaaagaggagaaagagtcacaggaaaatttaaag
gaacggccagtcacgcaaagtgttcatgaggagctccctgaggccgtgtccagcatcttc
cagattgaacaggaggatcttttggattggggagccataggagaagagaacttagcgttt
aagtcccaggaagcattagaaattatgccactagaggacttcagtaagccctcggaagct
ggtcgtccctcagttgatgtgaaatcaagcaggcggtcaactataaaagtgagatcttca
gaattattgcaaatcagaggaagagaagtcaaacgttcacaaaaaagtaaaccagttgtt
aagtcattgaaaccaagaaagactgtaagatctcaggagaataaaaaactaattaacaaa
atcccacaggccaatcccatttctcatctccatgacctgtgcgccacagtcccagatgcg
gagctgcctgtggatctgcacctggcttctcgagtgtaccacacctccaacaggacaggt
cacaaggccatgcttgggctattgggatcgtcactcttaggtgattgctgcttagatgaa
cagcgagatagaatactgtatggcattcctgttgagaaacagaagtacggcagcgttcct
ccagtcctaccagaggaattccctgaattggtgcagataactcaatggcaagctcaccaa
ccagacctgcagctctcaggagaagaagtttctgcatatccaggagcttcaaagatgttt
tggaatctttctgcacccaaattcgcgattccagaatcaaccatgagggaattgttatat
ccaaaatacgagagtgctcagacaagcaaaattttaactgagaaaatttctgaaagcaag
gaaagtgtggttattttggatacatacaccagaagaagttttaagtctttaataataaaa
aagtctgcatcatatgagaatatccaaaaatattccagtgcaccgtacacacgattaaag
agatcaaactctactgttgagttgcagaaagaagggaccccaccgccgtttatagttaag
gacgacatcgacagcaacctgaagcagctgcttttccagaagaggaaggagctggagcgc
cagcttgccaagcaaagggcgatatttgattcctccataaaaggcagcctggaggccatg
aatgagtcagacagcttaaaatacctgtctttttctcttgttgaagcatcaagaaaagct
ggcattagctacattgtgtatcccaggaaaaagaagaagctgttgaggaaaggaatgaaa
ttccagaagcttggccttgtgtatgagcagctctccaagccgccaaggaaattaaaaaga
tcaacatctcacggagtacttcctgagcagaaaaaatttttccttaaagttccgttatac
gaacgtcaaataaggtctcccagtgtacccgtggttttaaattttgatcaatttgttcaa
agtaaaggaggaataccagaaaatactgatcctcggacatgggctatcgagatcttcgtt
aaagacaaacctcagaaaacacctgcagcagccacgtatgttcagaaagacgttcccgag
ccagtgatagaccttcccaagttggaattatctgatcatatcaagtgtgaccttccccca
gaggtcattcaatattatgaatccgaagtggagcggttgactcaagagataagaaacgag
aaaagaattcctgtgtttgcctattgtcggcgtggagctatttatagaaaactgggaaag
ttgcaaagcgccatgaatgacctacaagaaaccatatttttggagccattgtttctcaat
gcctattggcaccgacatttcatttatcttttccaagacaaaattaatgatgcgttggat
gacttaaattttataaacaaatataataaaaaccatgcagaggcatacttgtcaaaggca
gagattttcagagagaagaaggaaatcacactggcaattctgaattacagtcaggcaatc
aagtgcagacccaaagacgctgatctctatttcaagaggggggagatgtatgagaagaca
aacagagtgctggccattgatgattattcgaaatgtatttaccataatcccaagagaaca
gatgccttaatgaagcgtgcagtatattactttgaaaatgaaaactggattggaaccata
catgattttacagctctgttaaaacttgagccccaaaattcttatgcaaggacaaaccga
gggagagcatattttaaaaggagtttatataaacaagccacccaagacttttctgttgcc
atccacttagatcctaacaattggttagcgctgtactaccgagcctgcgtgttcaggaag
actaatcccctcagagcgctgcaggattacagtgtttcagttctcataaatgatggctat
gataatcttaactgctttctacatcggggtgtactctatgcacaactaaaactttggatg
ttggcaatttgtgattttgaaactgttatttctctagaaagaactgctactttggcttat
gtgaatattggcctcctctatctgctccacctggataattacactgaagccttttggcga
ttctctgaggcaatccgagttgatcctttatatattcaaagctatatttgtagagcagaa
acctattataagctgcacaaactgaaaaaggcagtgtatgaattatctcgtgctatccac
ctccagccagatgcaatccagttgtatataataaggggacagtaccttcttatgatgaag
tgttatgatcttgcaaagttcactatttatcaagtagcagaaatgaacaaaggtgtcatt
gagctgacaccaatacagcaagcgctcatttactcattttgtgaaaaccacgacaaagct
attaacgtcttggagggggtcacagtcaatagaccagagatctccacttttgcactcttg
gcaaaagcccaaatgaaggctaagaaaatcaaggaagctgtgagaatatttaagaaggct
ttggaaatgttttcaagttctgacaaaggaccgaatgccactactgttttagcagagtgt
ctttataacctgggtctttgttacatggaggaaggcaacctacaaatggctttcgactct
tttacaaaagctgtgaaagcaaatcctgactttgcagaagccttttatcatcggggactt
tgtaaagtaaaactcaacaaggataactcaatcctggactttaatcgggcaattaccctc
aatcccaaacattaccaggcatatttaagccgagtagcctattatggtttaaagggcaga
tactccaaagcaatcatgaattgtaacgaagccatcagactttatcctgagagtgtgcgt
gcctacatctgcaggggagttctgaaatactacaacagaagttacaagctagctattaca
gatttaactacagctgtcaacatggacaagaacagttacacagcattttataatagagca
ctgtgttacactaagataaaggaacttgagatggctttgagggattatggaattgtgctg
cttcttgacacgggagaaaggatagcattaaataccttcattaaccgtggactcatctac
acccaactaaagcagtatggctttgcactagaggattttaaagaggctgcactgataagc
cagacaagcgtgagcctttttcaagcaaccgccatgtgccaccacagaattaaagaattt
gaaggtgctgttgacttcttcaccagggctgttaaaattaacacacgttttctggatgct
tatattggacgggggaattcttacatggagtatggacaagatgatgcccttatacaagca
cagaaggacttcctgaaagcactgcatattgacccatcatgtttaaaggcgaggattagt
ctaggctataatttgcaggcccaaggaaaattccagaaagcttggaatcactttacaatt
gccatagaagctgaaccaaagagctctctagcctatgaaggacgagctgtcatttgtctt
caaatgagtaataatttcgctgcaatgcaggatattaacgttgccatcaagatcaatact
acagcagagttcttgacgaatcgtggtgtgattcatgagtttatgggtcaacagcagaac
gcgatgacagactatcaggcagcaatttctctggaccccaagtactggctggcttacttc
aacgctgggaacatctactttcgtcaccggcagctttctcaggccagtgactacttttca
aaggctttggagtttaatccagaaaatgagtatgctctcatgaatcgagctgttacgaac
atgatattaaagaaatatgaagaagcagaaaaagatttttcacatgcagttgatctctgt
ccccactgggctgcattgtattttaacagagccagtttctatttctgcttaaagcaatat
gaacaagctgaagaagaccttagcataggcctgtctttgaagcctgatgaaggtgcaatg
tataatctcagatcacaagttcgtggcaaaatgggattcacagaggaagctatgagcgac
tataacagagcccttgatctggaagaatgtcccccagctatgtga
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integrated database retrieval system
