Arvicola amphibius (Eurasian water vole): 119818619
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Entry
119818619 CDS
T08327
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04015
Rap1 signaling pathway
aamp04510
Focal adhesion
aamp04722
Neurotrophin signaling pathway
aamp04910
Insulin signaling pathway
aamp05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
119818619 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119818619 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
119818619 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
119818619 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
119818619 (Rapgef1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
119818619
NCBI-ProteinID:
XP_038192166
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All DBs
Position
7:47519671..47639395
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AA seq
1088 aa
AA seq
DB search
MGNAVERQKPLRQSHLYPWKQDPQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSKI
PEKSVSKEARDRFLPEGYPIPLELEQQAVEFMSTSAVASRSQRQKNLCWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSATKVLEAILPLVQIDPQMQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
PASKPDSHPELLLTDREMEILNKTATGVSPSTELLPDSTSEEVAPPKPPLPGIRVVDNSP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYTQRRLSGGSRSCGG
ESPRLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
PPQAACSLSPLPESLGEAGPPFLGHTFQLPLGSCPQQEGQQTDTPPALPEKKRRSAASQT
TDSSGCRVSYERHPSQYDNISEDDLQNPVPVQPMPYPPFAAILPFQQGTSSAPVEFVGDF
SAPESAGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQSEHIYQQKNKMLME
VYGFSDSFCGSDSTQELAPPPALPPKQRQLEPPSGKDGNPRDPLVNSVSGKDSRENGERS
PKSLDALESGQSEEEVDELTLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDR
KDLVLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDEL
CLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILEKVDQKKLLRCAHSDQPLAARGV
AARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNM
SYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQRQ
TSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNF
SKRWQQFNILDSMRCFQQVHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRR
KTDREEKT
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgccgttgaaagacagaaacccctgagacaaagccatctgtacccctggaaa
caagacccgcagcgctctcacctctcctccttcaccatgaagctgatggacaaattccac
tctcccaaaatcaagagaacaccatccaagaagggaaagccagccgaggtgtcgaagatt
cccgagaagtctgtgagcaaagaggcaagagacagatttctaccagagggctaccctatc
cccttggaactggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccagg
tctcagaggcagaagaacctgtgctggctggaggagaaagagaaggaggttgtcagtgcc
ttgcgctactttaagaccattgtggacaaaatggccattgataagaaggttctggagatg
ctcccagggtcagccaccaaggtgctagaggccatcttacccctggtacagattgaccct
cagatgcagcacagctcagccctctcctcctgctatagccgagtataccagagcctcgcc
aacctcatccggtggtctgaccaagtgatgctggagggcgtgaactcagaagataaagag
atggtgacgactgtgaagggagtcatcaaggctgtgctggatggagtgaaggagctggta
aggctaactattgagaagcaggggcggccatcaccaacaagcccagtgaagcccagttcc
ccagccagcaagcctgacagccaccctgagctccttctgacagaccgagagatggaaatt
ctgaacaagacggcaacaggtgtgtcaccatccactgaattgctcccagactccactagt
gaagaggtcgcaccccccaagccccccttacctggcattcgggtggttgataacagtcca
ccagcattaccacccaagaaaagacagtccgctccatcccctactcgagtggctgtggta
gcccctatgagtcgagctaccagtggctccagtttacctgttggaatcaataggcaggac
tttgatgttgactgttacacccagaggcgcctgtccggaggcagccgctcctgcggtggt
gagtctcctcgcttgtccccctgcagcagcacaggcaaactcagccggtcagatgagcag
ctgtcctccctagacagggatagtgggcagtgctcgcggaacacaagctgtgaaacacta
gatcactatgaccctgactatgaattcctccagcaagacctctccaacgcagaccagatc
cctccacaggcggcctgcagcctcagcccactaccggagtccctgggggaggctggccca
ccctttcttggccatacttttcagctgcctctgggcagctgtcctcagcaggaggggcag
cagacagacactccacctgcccttcctgagaagaagcgcaggagtgcagcctcccagacc
acggacagctctggctgcagggtgtcctatgagcgacacccctcacagtatgacaacatc
tcagaggatgacctgcagaacccagtcccagtccagcctatgccctacccgccctttgct
gctatccttccctttcagcagggaacttcctcagcccctgttgaatttgtgggtgatttc
agtgctccagagtcagctggtgacccagagaagccacctcctctaccagagaagaaaaac
aaacacatgctggcctacatgcagctgctagaggactactcagagccacagccctccatg
ttctaccagacaccgcagagcgagcacatctaccagcagaagaacaagatgctcatggag
gtctacggcttcagcgactccttctgcggcagcgactccacgcaggagctggccccccca
cccgctctgccccccaagcagcggcagctggaaccaccatctgggaaggacggaaatccc
agagatcccttggtcaatagtgtgtctgggaaggacagcagagaaaatggggaaaggtcc
ccaaagtcactggatgctctggagtcaggccaatcagaggaggaagtggacgaactgacc
ctcattgaccacaatgaaattatggccaggctgacacttaagcaagagggtgatgatggg
ccagatgttcgtggaggttcaggagacatcttgctggtccatgctactgagacagacaga
aaagacctggtgctgtactgtgaggccttcctgacaacctacaggaccttcatcagccct
gaggagctcatcaagaaactgcagtaccgatacgagaagttctctcccttcgctgacaca
ttcaagaagcgagtcagcaagaacacgttctttgtgctggtgcgagtggtggatgagctc
tgcctggtggagttgacggaggagatcctgaagctactgatggagctagtcttccgtcta
gtgtgcagcggagagctcagcctggcccgtgtactccggaagaacattctggaaaaggtg
gaccagaagaagctgctcaggtgtgcccattccgaccagcctctggcagccaggggtgtc
gcagccaggccagggaccttgcatgatttccacagccacgagatagcagagcagctgaca
ctgctggacgccgagcttttctataagatagagattcctgaagttttgctttgggccaaa
gagcagaatgaggagaagagccccaatctgacccagttcacggagcacttcaacaacatg
tcctactgggtacggtccatcatcatgctgcaagagaaagcccaggaccgggagaggctg
cttctgaaattcatcaagatcatgaagcacctgcgcaagctgaacaacttcaactcctac
ctggccatcctctcagctctggactccgcacccatccgcagactggagtggcagaggcaa
acctcggagggcctggccgagtactgcacattgattgacagctcatcctctttccgagcc
taccgggctgccctctcagaggtggaacccccatgtatcccgtacctaggtctgatcctg
caggacctgaccttcgttcacctgggaaacccagactatattgacgggaaagtgaacttc
tccaagcggtggcaacagttcaacatcttggacagcatgcggtgcttccagcaggtgcac
tatgacatccggagaaacgacgacatcataaacttcttcaatgacttcagtgaccacctg
gccgaggaggccctatgggaactctctctgaagatcaaacccaggaacataacaaggcgg
aaaacagaccgtgaagagaagacctag
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