Arvicola amphibius (Eurasian water vole): 119818848
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Entry
119818848 CDS
T08327
Symbol
Scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119818848 (Scfd1)
Membrane trafficking [BR:
aamp04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
119818848 (Scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119818848 (Scfd1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
119818848
NCBI-ProteinID:
XP_038192597
LinkDB
All DBs
Position
7:complement(122942555..123007892)
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AA seq
639 aa
AA seq
DB search
MLGSKMASTASIRERQTVALKRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVK
ELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAIS
RSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITD
TEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTG
DPLGTGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESAGMENS
PAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMG
LEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFE
YEEKIMSKTTLDKSLLDVISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDA
GCNLSPLQYIKQWKAFAKMASTPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQ
NLPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIE
YQNLVDYIKAKQGKHILYGCSELFNATQFIKQLSQLGQK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaagcaagatggcgtccacggctagcattcgggagaggcaaacagtggctctg
aagcgaatgttgaacttcaatgtgcctcatgttaaaaacagcaccggagagccagtatgg
aaggtactcatttatgacagatttggccaagacatcatctctcctctgctgtctgtgaag
gagctgagagacatggggatcactctgcacctccttttgcactcggaccgggatcccatt
ccagatgttcctgcagtgtactttgtgatgccgactgaagaaaatattgacaggatgtgc
caggatcttcgaaatcagctttatgaatcctattatctaaattttatttctgcaatttcg
agaagtaagctggaagatattgcgaatgcagcgttggcagcaagtgcagtgacacaagtt
gccaaggtttttgaccagtatctcaattttattactttggaagatgacatgtttgtatta
tgtaatcaaaataaggagcttgtttcgtatcgtgccattaataggccagatatcacagac
acagagatggaaactgttatggacactattgttgacagcctcttctgcttttttgttaca
ttaggtgctgttcccattatccgatgctcaagaggaactgccgcagaaatggtggcagtg
aaactagataagaaactccgggaaaatctacgggatgcaagaaatagcctttttacaggt
gacccacttgggactggccagttcagcttccagaggcccttgttagtccttgtcgacaga
aacattgatttggcgacgcctttgcaccacacgtggacataccaagccctggtacatgat
gtgctggacttccacttaaacagagtaaacttggaagaatctgcaggaatggaaaattct
ccagctggtgctagaccaaagaggaaaaacaagaagtcttacgatttaactccagttgat
aaattttggcagaaacataaaggaagccccttcccggaagtcgcagaatcagtccagcaa
gagctcgagtcgtacagagcgcaggaggacgaggtgaagcgactgaagagcatcatgggt
ctagaaggagaggatgagggcgccatcagcatgctctctgataacactgcaaagctcacg
tcagctgtcagttctttgccagaactccttgaaaaaaaaagacttattgatctccataca
aatgttgccactgctgttttagaacacataaaggcaagaaaactggatgtatattttgaa
tatgaagaaaaaataatgagcaagactactctggataaatccctcctagacgtcatatct
gaccctgatgcaggaactccggaagacaaaatgaggctgtttcttatctattatataagc
acgcaacaagcaccttctgaggctgatttggaacagtataaaaaggccttaacagatgca
ggatgcaaccttagccctttacagtatatcaaacagtggaaggcttttgccaagatggcc
tcaactccagccagctatggtagcactaccactaaaccaatgggtctcttatcgcgagtc
atgaatacagggtcacagtttgtgatggaaggcgtgaagaacctggtactgaagcagcag
aatctacctgttacgcgaattttagacaatctcatggagatgaagtcaaaccctgaaact
gatgattatagatattttgatcccaaaatgctgcggagcaatgacagctcagttcctagg
aacaaaagtccattccaagaggccattgtctttgtggtaggaggaggcaactatattgaa
tatcagaatcttgttgactacataaaggcaaagcaaggcaaacatattttatatggctgc
agtgagcttttcaatgcgacccagttcataaagcagctgtcacaacttggacaaaaataa
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