Arvicola amphibius (Eurasian water vole): 119818857
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Entry
119818857 CDS
T08327
Name
(RefSeq) tetratricopeptide repeat protein 30A1
KO
K19683
tetratricopeptide repeat protein 30
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119818857
Cilium and associated proteins [BR:
aamp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119818857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_16
TPR_7
TPR_CcmH_CycH
TPR_14
SRP_TPR_like
TPR_Slam
ARM_TT21_C
ANAPC3
TPR_8
AF1548-like_C
TPR_6
TPR_11
Motif
Other DBs
NCBI-GeneID:
119818857
NCBI-ProteinID:
XP_038192607
LinkDB
All DBs
Position
7:8916292..8919255
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AA seq
664 aa
AA seq
DB search
MAWQSNSKIPDGEFTTVVYRLIRDFRYSEAVQLLAAELQRSPLSRAGLSLLAYCYYRLQE
FELAAECYEQLSQMHPELEQYRLYQAQALYKACLYPEATRIAFLLDNPTYQTRVLRLQAA
IKYSEGDLPGARSLVEQLLSGEAGEDSGGENDYDGQINLGCLLYKEGHYEAACSKFLAAL
QASGYQPDLSYNLALAYYSSRQYAPALKHIADIIERGIRQHPELGVGMTTEGIDVRSVGN
TVVLHQTALVEAFNLKAAIEYQLRNYEAAQEALTDMPPRAEEELDPVTLHNQALMNMDAR
PTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYDF
LDAMITCQTAPEEAFIKLDGLAGMLTEQLRRLTKQVQEARYNRDDEIVIKAVNEYDETLE
KYIPVLMAQAKIYWNLENYPMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIGF
YEPIVKKNYDNILSVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYDDPDKKIY
HLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYHKKLGTDTWYYAKRCFLSLLENMSKHM
MVLCDTVVQECVQFLEHCELYGRNIPAVIQQPLEDERMHSGKNTVTYESRQLKALIYEII
GWNV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcctggcaaagcaactctaaaatccccgacggtgagttcacgaccgtggtctaccgg
ctcatccgcgacttccgctactcagaggcggtgcagctgctggccgccgagctgcagagg
agccccctcagccgcgccgggctgtcgctgctggcctactgctactaccgcctgcaggag
ttcgagctcgctgcagagtgctatgagcagctgagccagatgcacccggaactcgagcag
taccgcctctaccaggcccaggcgctgtacaaggcctgcctgtatcccgaggccacgcgg
atcgccttcctcctggacaaccccacctatcagactcgcgtccttcgtctccaggctgct
atcaagtacagcgagggcgacctgccaggagccaggagcctggtggagcagctgctgagt
ggggaggctggagaagacagtggaggggagaatgattatgatggccagatcaacctgggc
tgtctgctctacaaggagggacactatgaagctgcctgctccaagttcttagcggccctg
caggcctctggctaccagcctgacctttcctacaacctggctttggcatattacagcagt
cgtcagtatgcccctgctctaaagcacatcgctgacatcattgagagaggcatccgtcag
cacccagagctaggtgtgggcatgaccaccgaaggcatagatgtccgaagtgttggcaac
accgtagtccttcaccagactgcactggtcgaagccttcaacctcaaggcagccatagag
taccagctgagaaactacgaggccgcccaggaagccctcactgacatgccgcccagggca
gaggaagagttggaccctgtgaccctgcacaaccaggctctgatgaacatggatgccaga
cctacggaggggtttgagaagctccagttcctgctccagcagaacccctttcccccagag
accttcggcaacctgctgctgctctactgtaaatatgagtactttgacctggcagctgat
gtcctggcagagaatgcccatttgacgtacaagttcctcacgccctatctctatgacttc
ttggatgccatgatcacttgccagacggctcctgaagaggctttcataaagctggatggg
ttagctggcatgctgactgagcagctcaggagactcactaagcaagttcaggaagcaaga
tacaacagagatgatgaaattgtcataaaagctgtcaatgaatacgatgaaactctcgag
aagtatatccctgtcctgatggcccaggcaaaaatctactggaatcttgaaaactatccc
atggtggagaagatcttccgcaaatctgtggaattctgcaatgaccatgatgtgtggaag
ctgaatgtggcccacgttctcttcatgcaggaaaacaagtacaaagaggccatcggcttc
tatgagcccatcgtcaagaagaactacgacaacattctgagtgtcagcgccattgtccta
gccaacctctgtgtctcctacattatgacaagtcagaatgaggaagccgaggagctgatg
aggaagattgagaaggaggaagagcaactctcatatgatgacccagacaagaaaatctac
cacctctgcattgtgaacttggtgataggaaccctctattgtgccaaaggaaactatgac
tttggtatctccagggttatcaaaagcctggagccttaccataaaaagctaggaactgac
acatggtattatgccaaaagatgcttcctgtccttgctagaaaacatgtcaaaacacatg
atggtgctttgtgacactgttgttcaagaatgtgtccagtttctagagcactgtgaactg
tatggcagaaacatccctgctgttatacaacagcctttggaggacgagagaatgcacagt
ggaaagaatacagtcacgtatgagtccagacaattgaaagcgttgatttatgagatcata
gggtggaatgtttag
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