Arvicola amphibius (Eurasian water vole): 119818858
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Entry
119818858 CDS
T08327
Name
(RefSeq) tetratricopeptide repeat protein 30B
KO
K19683
tetratricopeptide repeat protein 30
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119818858
Cilium and associated proteins [BR:
aamp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119818858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_16
TPR_CcmH_CycH
TPR_7
ANAPC3
TPR_14
TPR_Slam
ARM_TT21_C
SRP_TPR_like
TPR_8
TPR_11
TPR_6
Ribosomal_S16
Motif
Other DBs
NCBI-GeneID:
119818858
NCBI-ProteinID:
XP_038192608
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All DBs
Position
7:8957987..8961696
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AA seq
664 aa
AA seq
DB search
MAGLSSSQIPDGEFTTVVYRLIRDFRYSEAVQLLAAELQRSPRSRAGLSLLAYCYYRLQE
FELAAECYEQLSQMHPELEQYRLYQAQALYKACLYPEATRVAFLLDNPTYQTRVLRLQAA
IKYSEGDLPGARSLVEQLLSGEAGEDSGGENDYDGQINLGCLLYKEGHYEAACSKFSAAL
QASGYQPDLSYNLALAYYSSRQYAPALKHIADIIERGIRQHPELGVGMTTEGIDVRSVGN
TVVLHQTALVEAFNLKAAIEYQLRNYEAAQEALTDMPPRAEEELDPVTLHNQALMNMDAR
PTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYDF
LDAMITCQTAPEEAFIKLDGLAGMLTEQLRRLTIQVQDARHNRDDESAKKAVNEYDETLE
KYIPVLMAQAKIYWNLENYPMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIGF
YEPIVKKNYDNILSVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYGDPDKKIY
HLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYHKKLGTDTWYYAKRCFLSLLENMSKHT
IMLRDTVVQECVQFLEHCELYGRNIPAVIEQPLEEERMHSGKNTVTYESRKLRALIYEII
GWNV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgagcagctcgcagatccccgacggtgagttcacgaccgtggtctaccgg
ctcatccgcgacttccgctactcagaggcggtgcagctgctggccgccgagctgcagagg
agcccccgcagccgcgccgggctgtcgctgctggcctactgctactaccgcctgcaggag
ttcgagctcgctgcagagtgctatgagcagctgagccagatgcacccggaactcgagcag
taccgcctctaccaggcccaggcgctgtacaaggcctgcctgtatcccgaggccacgcgg
gtcgccttcctcctggacaaccccacctatcagactcgcgtccttcgtctccaggctgct
atcaagtacagcgagggcgacctgccaggagccaggagcctggtggagcagctgctgagt
ggggaggctggagaagacagtggaggggagaatgattatgatggccagatcaacctgggc
tgtctgctctacaaggagggacactatgaagctgcctgctccaagttctcagcggccctg
caggcctctggctaccagcctgacctttcctacaacctggctttggcatattacagcagt
cgtcagtatgcccctgctctaaagcacatcgctgacatcattgagagaggcatccgtcag
cacccagagctaggtgtgggcatgaccaccgaaggcatagatgtccgaagtgttggcaac
accgtagtccttcaccagacggcactggtcgaagccttcaacctcaaggcagccatagag
taccagctgagaaactacgaggccgcccaggaagccctcactgacatgccgcccagggca
gaggaagagttggaccctgtgaccctgcacaaccaggctctgatgaacatggatgccaga
cctacggaggggtttgagaagctccagttcctgctccagcagaacccctttcccccagag
accttcggcaacctgctgctgctctactgtaaatatgagtactttgacctggcagctgat
gtcctggcagagaatgcccatttgacgtacaagttcctcacgccctatctctatgacttc
ttggatgccatgatcacttgccagacggctcctgaagaggctttcataaagctggatggg
ctagctggcatgctgactgagcagctcaggagactcaccatacaagtgcaggatgcaaga
cacaacagagatgatgaatctgctaaaaaggcggtgaatgaatacgatgaaactctcgag
aagtatatccctgtcctgatggcccaggcaaaaatctactggaatcttgaaaactatccc
atggtggagaaaatcttccgcaaatctgtggaattctgcaacgaccatgatgtgtggaag
ctgaatgtggcccacgttctcttcatgcaggaaaacaagtacaaagaggccatcggcttc
tatgagcccatcgtcaagaagaactacgacaacattctgagcgtcagcgccattgtccta
gccaacctctgcgtctcctacatcatgacaagtcagaatgaggaagccgaggagctgatg
aggaagattgagaaggaggaagagcaactctcatatggtgacccagacaagaaaatctac
cacctctgcattgtgaacttggtgataggaaccctctattgtgccaaaggaaactatgac
tttggtatctccagggttatcaaaagcctggagccttaccataaaaagctaggaactgac
acgtggtattatgccaaaagatgcttcctgtccttgctagaaaacatgtcaaaacatacg
atcatgctgagggacactgttgttcaagaatgtgtccagtttctagagcactgtgaactg
tatggcagaaacatccctgctgttatagaacagcctttggaggaagagagaatgcacagt
ggaaagaatacagtcacgtatgagtcgagaaaattaagggctctgatttatgagatcatt
ggatggaatgtgtaa
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