Arvicola amphibius (Eurasian water vole): 119818873
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Entry
119818873 CDS
T08327
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp05145
Toxoplasmosis
aamp05146
Amoebiasis
aamp05165
Human papillomavirus infection
aamp05200
Pathways in cancer
aamp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119818873 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119818873 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119818873 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119818873 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
119818873 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119818873 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
119818873 (Lamb1)
05145 Toxoplasmosis
119818873 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
CorA
ATG17_like
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
119818873
NCBI-ProteinID:
XP_038192631
LinkDB
All DBs
Position
7:complement(138469836..138538189)
Genome browser
AA seq
1834 aa
AA seq
DB search
MDEPLSSLSTFAFLPLYLSRKEDTKKRQAASLPRPPSPAVSPRLQGLDMGLLQVFAFGVL
ALWGTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLTVTSTCGLHKPEPYCIVSHLQE
DKKCFICDSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFH
FTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDS
RYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRM
EIREKYYYAVYDMVVRGNCFCYGHASECAPVDGIDEEVEGMVHGHCMCRHNTKGLNCELC
MDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFVATGNVSGGVCDDCQHNTMGR
NCEQCKPFYYQHPERDIRDPSLCEPCTCDPAGSENGGICDSYTDFSVGLIAGQCRCKLHV
EGERCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQHCDQ
CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTL
DHYIYEAEEANLGPGVTVVERQYIQDRIPSWTGPGFVQVPEGGYLEFFIDNIPYSMEYDI
LIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCF
EKGMNYTVRLELSQYTASGNDVENPYTLIDSLVLMPYCKSLDIFTVGGSGDGEVTNSAWE
TFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQC
QCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCSLQGSVDAFCDAVTGQCHCFQGIYARQCD
RCHPGYWGFPSCQPCQCNGHAEHCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGD
HCRPCPCPDGPDSGRQFARSCYQDPITFQLACVCDPGYIGSRCDGCASGFFGNPSDFGGS
CQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNS
LGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDQCAPNTWQLASGTGCEPCNCNAAHSF
GPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCV
CVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIGELTNRTHKFLEKAKALKISGV
IGPYRETVDSVEKKVNEIKDILAQSPAAEPLKNIGNLFEEAEKLTKDVTEKMSQVEMKLS
DTASQSNSTAGQLDALQAEAKSLDKTVKELAEQLEFIKNSDIQGALDSITKYFQISLEAE
KRVNASTTDPNSTVEQSALTRDRVEDLMLEQESQFKEKQEEQARLLDELAGKLQSLDLSA
AAEMTCGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVL
SALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQIRDFLT
EDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAE
MLLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEAAIKQADEDIQGTQNLLTSIES
ETAASEESLTNASQRISKLERNVEELKRKAAQNSGEAEYIEKVVYSVKQSADDVKKALDG
ELDEKYKKVESLIAKKTEESADARRKAELLQNEAKTLLAQANSKLQLLEALERKYEDNQK
YLEDKAQELVRLEGEVRSLLKDISEKVAVYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcccctctcctctctctcaacatttgcctttctccccctctacctctccaga
aaggaagacacgaaaaaaaggcaggcagcttccctaccgcgtcctccctccccggctgtg
tcccctcggctgcagggactggacatggggctgctccaggtgttcgccttcggtgttcta
gccctgtggggtacccgagtgtgtgctcaggaaccagagttcagttacggctgtgcagaa
ggcagctgctaccctgccactggcgaccttctcatcggccgagctcaaaagctcacagtg
acctcgacatgcggactgcacaaaccagagccctactgtattgtcagccacctgcaggag
gacaagaaatgcttcatatgtgattcccaagatccttatcatgagaccctcaatcctgac
agccatctcattgaaaatgtggtcaccacatttgctccaaaccgccttaagatttggtgg
caatctgaaaatggtgtggagaacgtaactatccaactggatctagaagcagaattccat
ttcactcatctcataatgacttttaagacattccgtccagctgctatgctgatagagcgg
tcttctgactttgggaagacttggggtgtgtacagatactttgcctatgactgtgagagc
tcattcccaggcatttcgactggccccatgaagaaagtggatgacatcatctgtgactct
cgatattctgatattgagccctcaacagagggagaggtgatatttcgtgctttagaccct
gcttttaagatagaagatccttatagcccaaggatacagaatctattaaaaatcaccaac
ttgagaataaagtttgtgaaacttcacactttgggagataaccttttggactctagaatg
gaaatcagagagaaatactattatgctgtttatgatatggtggttcgtgggaactgcttc
tgctatggccatgccagcgaatgtgcccccgtggatggaattgatgaagaggtggaagga
atggttcatggacactgcatgtgcaggcacaacaccaaaggcttgaactgtgagctgtgc
atggatttctaccatgatttgccatggagacctgctgaaggtcgaaacagcaatgcctgc
aaaaaatgcaactgcaacgaacattccagctcatgtcactttgacatggcggttttcgtg
gccactgggaacgtcagcgggggagtgtgtgatgactgtcagcacaacaccatgggacgc
aactgtgaacagtgcaaaccattctactaccagcaccccgagagggacatccgagacccc
agtctctgtgaaccatgtacctgtgacccagctggttctgaaaatggaggaatctgtgac
agttacactgatttttctgtgggtctcattgctggtcagtgtcggtgcaaattgcatgtg
gaaggagagcgttgtgatgtttgtaaagaaggcttctatgatttaagcgctgaagaccca
tttggttgtaaatcatgtgcctgcaatcctctggggacaattcctggaggaaatccttgt
gattctgagactgggtactgctactgtaagcgactggtgacaggtcagcactgtgaccaa
tgtctgccacaacactggggcttaagtaatgatttggatggatgtcgaccttgtgactgt
gaccttggaggagcattaaacaatagctgttcagaggactccggccagtgctcctgcctg
cctcatatgattgggaggcagtgcaatgaggtggaatctggttactatttcaccaccctg
gaccactacatctacgaagccgaggaagccaatctggggcctggagtcactgtggtggaa
cggcagtacattcaggaccggattccttcctggacaggacctggcttcgtccaagtgcct
gaggggggttatctggagtttttcattgacaatataccatattccatggagtatgatatc
ctaattcgctatgagccacagctgccggaccactgggagaaagctgtcatcaccgtacag
cgacctggaaagattccaaccagcagccgatgtggtaatactgttcctgatgatgacaac
caggtggtgtctttgtcaccaggctcaagatatgtcgtcctccctcgcccagtgtgcttt
gagaagggaatgaactatacagtgaggttggagctgtcccagtacacagcatctggcaat
gatgtggagaacccctacacgctcattgactcactggttctcatgccctactgtaaatcc
cttgacatcttcactgttggaggctcgggagacggggaggtcaccaacagtgcctgggaa
accttccagaggtaccggtgtctggagaatagccggagtgtagtaaaaacaccgatgaca
gatgtctgcagaaacatcatcttcagcatttctgccttgattcaccagacaggcctcgct
tgtgaatgtgaccctcaaggttctctaagctctgtgtgtgaccccaacggaggtcagtgt
cagtgccggcctaatgtggttggaagaacatgcaacaggtgtgcaccaggcacctttggc
ttcggccccaacggatgcaaaccttgtgactgtagtctacagggatctgtggatgctttc
tgcgatgctgtcacgggccagtgccactgtttccagggcatatatgctcggcagtgtgac
cgatgtcaccctggctactggggctttcccagctgccagccctgccaatgtaacggtcat
gctgaacactgtgacacggtgacaggggagtgtctgagctgtcaggactacaccactggc
cacaactgtgaaaggtgcctggctggttactatggtgatcccatcattggctctggagac
cactgccgcccttgcccttgcccagatggtcctgacagtggacgccagtttgccaggagc
tgctatcaggaccccattactttccagcttgcatgtgtttgtgatcctggttacattggc
tccagatgtgatgggtgtgcctctgggtttttcggcaatccctcagattttggagggtct
tgtcagccttgtcagtgtcaccacaacattgatacgactgatccggaagcctgtgacaag
gagacaggaaggtgcctcaagtgcctgtaccacacagaaggggaccattgccagctctgc
cagtatggatactacggtgatgctcttcggcaagactgtagaaagtgtgtctgcaattcc
ctgggcaccgtgaaggagcactgtaatggctctgactgccactgtgacaaagccactggt
caatgttcatgtcttcccaatgtgatcggtcagaactgtgatcagtgtgcacccaatacc
tggcagctggccagtgggaccggctgtgagccatgcaattgcaatgctgcacattccttt
gggccatcctgcaatgagttcaccgggcagtgccagtgcatgccgggctttggaggccgt
acctgcagcgagtgccaggagctcttctggggagaccctgatgtggaatgccgagcctgt
gattgtgatcccaggggtattgagacaccacagtgtgaccagtccacaggccaatgtgtc
tgtgtggagggtgttgagggtccacgctgtgacaagtgcacccgagggtactcaggggtc
ttccctgactgcacaccctgccaccagtgctttgctctctgggatgtgatcattggtgag
ctgaccaacaggacccacaaattcctggagaaagccaaagctttgaaaatcagtggtgtg
attggtccataccgggagaccgtagactctgtggagaagaaagtcaatgagataaaagac
atcctggcccagagcccagcagcagaaccactgaaaaacattggcaatctctttgaggaa
gcagagaaattaaccaaagatgttacagaaaagatgagtcaagtagaaatgaaattatct
gatacagcttcacagagcaatagcacagctggacagctagatgcactgcaggcagaggca
aagagccttgacaagactgtgaaagaactggctgagcagctagaattcatcaaaaactcc
gatattcagggtgccttggatagtatcaccaagtattttcagatctctctcgaggcagaa
aagagggtgaatgcctccaccacagatcccaacagcacagtggagcagtcagcactcacc
cgagacagagtagaagatttgatgttggagcaagagtcccagttcaaggaaaaacaagag
gaacaggcacgccttctggacgaactggccggcaaactgcagagtctagatctgtcagct
gctgctgagatgacctgtggaacgcctccaggggcagattgttctgaaagtgaatgtgga
ggccctaactgcagaactgatgaaggagagaagaaatgtggggggcctggatgtggtggt
ctggtcaccgtggcccatagcgcctggcagaaagccatggattttgaccgtgatgttctg
agtgccctggctgaagtggaacagctctccaaaatggtctctgaagcaaaagtaagagca
gatgaagctaagcagaatgctcaggatgtcctgttgaaaacaaatgctaccaaagaaaaa
gtggacaagagcaatgaggacctgaggaacctcatcaagcagatcagagactttctgact
gaggatagtgctgatctagacagtattgaagcagttgctaatgaagtactgaaaatggaa
atgcctagcactccacagcagttacagaacctgacagaagacatccgggaacgagttgaa
actctttctcaagtagaagttattttgcagcagagtgctgctgacattgccagagctgag
atgttgctggaagaagcaaaaagagcaagcaaaagtgcaacagatgtcaaagtcactgca
gacatggtgaaagaagcattagaagaggctgaaaaggcccagattgcagcagaggcggcc
atcaaacaagctgatgaggatatccagggaacccaaaaccttctgacatcgattgaatct
gaaactgcagcctctgaggaaagcctgaccaacgcctcccaacgcatcagcaagcttgag
aggaatgtggaagagcttaagcgcaaagctgcccagaattctggggaagcggaatatatt
gaaaaagtagtatatagtgtaaagcagagtgcagacgatgttaaaaaggctctagatggc
gaacttgatgagaagtacaagaaggtagagagtttaattgcaaaaaaaactgaggagtca
gcagatgccaggaggaaagctgagctgctacaaaatgaagcaaaaacactcttggctcaa
gccaacagtaagcttcagctgctggaagccttagaaagaaaatatgaagacaatcaaaaa
tacttagaagataaagctcaggaattagtgcgactggaaggagaggtccgttcactcctt
aaggacataagcgaaaaggttgctgtttacagcacctgcttgtaa
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integrated database retrieval system
