Arvicola amphibius (Eurasian water vole): 119818950
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Entry
119818950 CDS
T08327
Symbol
Cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119818950 (Cbll1)
04131 Membrane trafficking [BR:
aamp04131
]
119818950 (Cbll1)
04121 Ubiquitin system [BR:
aamp04121
]
119818950 (Cbll1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119818950 (Cbll1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
119818950 (Cbll1)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119818950 (Cbll1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119818950 (Cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
DZR
Zn_ribbon_6
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
119818950
NCBI-ProteinID:
XP_038192756
LinkDB
All DBs
Position
7:138309332..138324374
Genome browser
AA seq
513 aa
AA seq
DB search
MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKVKPAARTQRTISRMPAKAPAGDE
EVSKLAYRSNLVPLKKQKSYCSEGFDYNEEQRYDCKGGELFGSQRRFPGHLFWDFKINIL
GEKDDTPVHFCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCGDAVQRIEQC
TRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKPVTRASLENVHPPIAPPPAEIPD
RFIMPPDKHHMSHIPPKQHIMMPPPPLQHVSHEHYNQPHEDIRAPPAELSLAPPPPRSVS
QETFRISTRKHSNLITVPIQDDSSSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQ
QHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPY
MNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPR
GPPPPPRMQGPPSQTPLPGPHHPDQTRYRPYYQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggatcacactgacaatgaattacaaggcactaatagttctggatccttgggtggtctt
gatgttcgcagaagaattcctataaaactcatctccaaacaagccaacaaagtgaaacct
gcagctcgaactcaaaggactattagcaggatgcctgcaaaggccccagcaggtgatgaa
gaagtcagcaaactggcgtacaggtcaaatttggttcctttaaaaaaacaaaaaagttac
tgttcagaaggatttgattataatgaagagcaacggtatgactgtaaagggggcgaactc
tttggaagtcagcgaagatttccaggacaccttttttgggattttaagataaacatctta
ggtgaaaaggatgatacaccagttcatttctgtgacaaatgtggattgcctattaaagtc
tatgggagaatgattccatgcaagcatgtcttttgctatgactgtgctattttacatgaa
aaaaagggagataaaatgtgcccaggctgtggtgatgctgtgcagcggattgagcagtgt
acacgaggctctctcttcatgtgtagcattgttcaaggttgcaagagaacgtatctgtct
cagagagacttacaagctcatatcaaccatcgccatatgagagctgggaagcctgttacc
cgtgcttcacttgagaatgttcatcctcctattgcccctcctccagccgagatccccgat
cgtttcataatgccgccggacaagcaccatatgagccatattcctcccaagcagcacatt
atgatgccgccacctcctctgcagcatgtgtcgcatgagcactacaatcagccacatgag
gatatccgtgctcctccagcagagttgtccctggctccgcctccacctcggtcggtcagt
caggaaacctttcgtatttcaacaagaaaacacagcaatttaataactgtccctattcag
gatgactcaagttcaggtgctagagaaccaccacctcctgccccagcgcctgctcaccat
catcctgaatatcagggccaaccagtggtatcgcaccctcatcatattatgcctccacag
caacattatgcaccacccccacctcctccaccaccaataagccatccaatgccacatcct
ccccaggctgcaggtactcctcacttggtgtacagccaagctccacctccaccaatgacc
tctgctccaccaccaataacccctccccctggacatattattgcccagatgccaccttat
atgaatcatcctcctccaggaccccccccacctcagcatggtggtccacctgtaactgca
ccccctccccaccattacaaccctaactctttaccccagtttactgaagatcaaggaact
ctgagccctccatttacacagccaggaggaatgagtcctggtatatggcctgcaccaaga
ggtccaccaccacctccacgaatgcaaggcccaccttctcaaaccccactacctggacca
catcatccagatcaaacaagatacagaccatattaccagtga
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