Arvicola amphibius (Eurasian water vole): 119818962
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Entry
119818962 CDS
T08327
Symbol
Pals1
Name
(RefSeq) MAGUK p55 subfamily member 5 isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04390
Hippo signaling pathway
aamp04530
Tight junction
aamp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
119818962 (Pals1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119818962 (Pals1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
119818962 (Pals1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119818962 (Pals1)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
PDZ domain-containing proteins
MAGUK family proteins
119818962 (Pals1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119818962
NCBI-ProteinID:
XP_038192780
LinkDB
All DBs
Position
7:complement(99981864..100064382)
Genome browser
AA seq
675 aa
AA seq
DB search
MTTSYMNGHVTEESATGIKNLDLTSPEEHQKHREMAVDCPGDLGTRMMPVRRSAQLERIR
QQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYAVK
ILEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVHMSKASPPF
PLISNVQDLVQEVQTVLKPVHQKEGQELTALLNAPHIQALLLAHDKVAEQEMQLEPITDE
RVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRNRRDHEVAGRDYHFVSRQAFEADI
AAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNSGHYFDTAVVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcgtatatgaatgggcatgtaacagaggaatcagccaccggaataaaaaat
cttgatcttacatcaccagaggaacatcagaagcaccgagagatggctgttgactgccct
ggagatctgggcaccaggatgatgccagtgcgaagaagtgcacagttggagcgtattcga
cagcaacaggaggatatgagacgtaggcgtgaggaagaagggaaaaagcaagaacttgat
ctaaattcttcaatgagacttaagaaactagctcaaattcctccaaagactggaatagat
aaccctatatttgacacagaagaaggaattgttttagaaagtcctcactatgctgtgaaa
atattagaaattgaagacttgttttcctcgcttaaacacatccagcacactttggttgat
tcccagagccaggaggatatctcactgcttttacagcttgtgcagaacagagattttcag
aatgcgttcaagatacacaatgctgtcacagtgcacatgagcaaggccagtcccccattt
cctcttatctccaatgtacaagaccttgtacaagaggtacaaactgtcttaaagcctgtc
catcagaaggaaggacaagaattaactgctttgttaaatgctccacatattcaggcactt
ttactggcccacgataaggttgctgagcaggaaatgcagctagaacccattacagatgag
agagtgtacgaaagtatcggccagtatggaggagaaactgtaaaaatagttcgaatagaa
aaggctcgtgatattccattgggtgccacggtccgtaatgaaatggactctgtcatcatt
agccggatagtgaaagggggggccgcagagaagagcgggctcttacacgaaggagatgag
gttctggagatcaacggcattgaaatccgggggaaggatgtcaatgaggtttttgattta
ttgtctgacatgcatggtactttgacatttgttctgatccctagtcaacaaatcaagcct
cctcctgctaaagaaactgtaatccatgtaaaagctcattttgattatgatccctcggat
gacccttatgttccatgtcgagagttaggtctgtcttttcaaaaaggagatatactccat
gtgatcagtcaagaagatccaaattggtggcaggcctatagagagggggacgaagacaat
cagcctctagctggacttgttccagggaaaagcttccagcagcaacgagaagccatgaag
caaaccatagaagaggataaggagccagaaaagtcaggaaaactgtggtgtgcaaagaag
aataaaaagaagaggaaaaaagttttatataacgccaataaaaatgatgattatgacaat
gaagagatcttaacatatgaggaaatgtcactttaccatcagccagcaaatagaaaaaga
cctatcatattgattggtccacagaactgtggccagaatgaactgcgtcagagactcatg
aacaaagaaaaagaccgctttgcatctgcagtccctcatacaactcggaataggcgagac
cacgaagtggctggtagagactaccactttgtttcacggcaagcgtttgaagcagatata
gcagctggcaagttcattgaacacggtgaatttgagaaaaatttgtatggaaccagcata
gattctgtacgacaagtaattaactctggcaaaatatgtctcttaagtcttcgaacacag
tctttgaagaccctccggaattcagatttgaaaccatatatcatcttcattgcaccacct
tcacaagaaagacttcgggcattgttagccaaagagggcaagaatccaaagcctgaagag
ctaagggagatcattgagaagactagagagatggagcaaaacagtggccactactttgac
actgcagtcgtgaactcggatcttgataaagcctaccaggagttacttaggctcatcaac
aaactggacactgaacctcagtgggtgccatccacttggctaaggtga
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