Arvicola amphibius (Eurasian water vole): 119819016
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Entry
119819016 CDS
T08327
Symbol
Vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119819016 (Vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119819016 (Vti1b)
Membrane trafficking [BR:
aamp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
119819016 (Vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
Fusion_gly
KxDL
OmpH
DUF6720
Cir_Bir_Yir
EzrA
DUF745
DUF4407
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
119819016
NCBI-ProteinID:
XP_038192908
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Position
7:99667875..99682310
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AA seq
232 aa
AA seq
DB search
MATSAASSEHFEKLHEIFRGLLEDLRGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLA
EMEEELRYAPLTFRNPMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDVKFGAYALENE
HLNRQQSQRALLLQGTESLNRATQSIERSHRIATETDQIGTEIIEELGEQREQLERTKNR
LVNTNENLSKSRKILRSMSRKVTTNKLLLSIIILLELAILVGLVYYKFFRHH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccacctccgccgcctcctccgagcatttcgagaagctgcacgagatcttccgcggc
ctcctggaagacctacgaggggtgcccgagcggctgctggggaccgccgggaccgaagag
aagaagaagctggtcagagattttgatgaaaagcaacaggaagcaaatgaaacgttggca
gaaatggaggaagaactacggtatgcacccctgacttttcgtaatcccatgatgtctaaa
cttcgaaactatcggaaggaccttgctaaactccatcgcgaggtgagaagcacacctttg
acagccacacctggaggccgaggagatgtgaagttcggcgcatatgcattagagaatgag
catttgaatcggcaacagtctcaaagagcattgcttctacaaggcacagaaagcctgaac
cgggccacccaaagcattgagcgttctcatcggattgccacagaaactgaccagattggt
acagaaatcatagaagagctgggggaacaacgggaacagttggaacgtaccaagaataga
ctggtaaacacaaatgaaaacttgagcaaaagccgaaagattctccgctcaatgtccaga
aaagtgacaaccaacaagctgctgctgtccatcatcatcttactggagctagccatcctg
gtcggtctggtgtactacaaattctttcgacaccattga
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integrated database retrieval system
