Arvicola amphibius (Eurasian water vole): 119819256
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Entry
119819256 CDS
T08327
Symbol
Dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119819256 (Dcaf5)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119819256 (Dcaf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
WD_LRWD1
WDR90_beta-prop_4th
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
119819256
NCBI-ProteinID:
XP_038193281
LinkDB
All DBs
Position
7:98422878..98533180
Genome browser
AA seq
938 aa
AA seq
DB search
MKRRAGLGGSMRSVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIE
FSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVSPIQLKGEHHSNIFCLAFNSGNTKVFSGG
NDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEP
FCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVR
FNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSD
DFNLYMWKIPADPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIW
SPYKQPGCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFD
SLVRREIEGWSSDSDSDLSESTILQLHAGVSERSGYTDSESSASLPRSPPPTVDESADNA
FHLGPLRVTSTNAVVSTPATPTCEDAASRQQRLSALRRYQDKRLLALSNESDSEENACEA
ELDTDLFPRPRSPSPEDGSSSSSSSSSSEEEEELNQRRSTTRQRNAMRRRHKTAREERPN
APVKPTNTYIGEDNYDYPQIKVDDLSSSPNSSPERSTSNLDIQPSRTPPTANMESVERKI
YKAYKWLRYSYISYSNNKDGETSLVAEEADEGRAGTSPRDNPTPSSSKEACPTQRDQDLP
PEGCSKDACKEGTSARNPSGGTSHEQSSHPWAEVPEGTSQDTSSNSPLEHSFETKKLNGK
ALSSRTEEPPSPVPKASGSTLNSASGNCPRTQSDDSEERSLETLCANHNNGRLHPRPPHP
HNNGQNSGELETVVYSSPGHPDTDHDNPSLAGTLLHKDCCGSEMACETPSAGMREDPTDP
SAMDSSKGVHDHSGLKRHRIELEDTDSENSSSEKKLKT
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagagctggcctggggggcagcatgaggtcagtggtgggcttcttgtcccag
cggggcttgcatggggaccccctgctcactcaggactttcagaggagacgcctgcggggc
tgcagaaacctctacaagaaggacctcctcggccacttcggctgtgtcaatgccattgaa
ttctccaacaatggaggccagtggctggtctcaggaggagatgaccgccgagttctgctg
tggcacatggaacaagctatccattccagggtcagtcccatacagctgaagggagagcac
cattccaacattttctgccttgctttcaacagtggcaacaccaaagtcttctctggagga
aatgatgagcaagttatcctccatgatgttgaaagcagtgagaccctggatgtgtttgct
catgaagatgcagtgtatggcttatcggtgagcccagtgaatgacaacatttttgctagc
tcttcagatgatggccgggttctcatttgggacatccgggaatctccccatggagagccc
ttctgcctggcaaattatccatcagcctttcacagtgtcatgtttaaccctgtggagccc
aggttattggccacagccaattcaaaggaaggcgtgggactatgggacattagaaaacct
cagagttctctcctgcgctatggtggcaacctatctctccagagtgccatgagtgtgcga
ttcaacagcaatgggacccaactcctggccctgcggcggcgcctgccccctgtcctctat
gacatccactcccgcctgccagtgttccagtttgacaatcagggttacttcaactcatgc
accatgaagagctgctgttttgcaggggatcgtgaccagtatatcctctcaggctctgat
gacttcaacctgtacatgtggaagattcctgcagatccagaagcaggtggcattggcaga
gtggtcaatggagccttcatggtgctgaaagggcatcggtccattgttaaccaggtccgg
tttaacccccacacatacatgatctgctcttctggtgtagaaaagattatcaagatctgg
agtccatacaagcagccaggatgtacaggagacctcgacggtcggattgaagatgattcc
cgctgcctctacacccatgaagagtatatcagccttgtactgaacagcggaagtggcctg
tcccacgactatgctaaccagtcggtccaggaagacccccggatgatggctttctttgac
tctttggtgcgccgcgagatcgagggctggagttccgactcagacagtgacctcagcgag
agcaccatccttcagctgcacgcaggggtcagtgagcgctcgggctacactgactcagag
tcctcagcctcactgccccgttccccacctcccacagtagacgagtctgccgacaatgcc
ttccacctgggacccctgcgagtcacctccacaaatgccgtggtgtcaaccccagcaacg
ccaacgtgtgaggatgcggcatctcgccagcagcgcctatctgctctgcgtcgctaccag
gacaagcgcctcctggccctgtccaatgagtctgattctgaagagaatgcctgtgaggct
gaactggacacagatctcttccctcggccgaggtcgcccagccccgaggatggatccagc
agctccagcagctccagtagctcggaggaagaagaggaactgaaccaacgccgatccacc
actcggcagcgaaacgccatgcggaggcggcataaaacagcccgggaagagcggcccaac
gctccagtcaagcccaccaacacctacattggagaggacaattatgactacccccagatc
aaggtggatgacctctcctcctccccaaactcctcccctgagcggagtacttccaatctg
gatatccagccaagccggaccccaccaactgccaatatggaatcagtagagcgaaagatt
tataaagcttacaagtggctccgctactcctacatctcttactcgaataacaaagatgga
gaaacttccttagtggcagaggaggcagatgaagggagagcaggaaccagccccagagac
aacccaaccccttcttccagtaaggaagcctgcccaacccagagagaccaggacctgccc
cctgaaggctgcagcaaagatgcttgtaaagaagggacttccgccaggaatcccagcggt
ggcacaagccacgagcagagcagccatccttgggcagaggtgccagagggcacctctcag
gacactagcagtaacagccctctagaacactcttttgaaaccaagaagctcaatggaaag
gccctgagcagccggactgaggagccaccctctcctgtccccaaagcatctggttccact
ctgaacagtgcgtctggcaactgtcccaggacccagtctgatgatagtgaggaaaggagc
cttgaaaccctctgtgccaaccacaacaatggacgcttgcacccccgaccccctcacccc
cacaacaatgggcagaactctggggagctggagacagtggtctactcttctccaggacac
ccagacactgaccatgataacccatccctggcagggacacttctacataaagattgttgt
gggtctgaaatggcctgtgagacccccagtgctggaatgagagaagaccccactgacccc
tcagccatggacagcagcaagggtgttcatgaccacagtggcctcaaaaggcatcgaatt
gaattggaagacacagattcagagaattcctcttcagagaagaaattaaaaacatga
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