Arvicola amphibius (Eurasian water vole): 119819328
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Entry
119819328 CDS
T08327
Symbol
Npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119819328 (Npas3)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119819328 (Npas3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
119819328
NCBI-ProteinID:
XP_038193399
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All DBs
Position
7:complement(120521448..121347058)
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AA seq
971 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGAAANGTPQNVQGITSYQQRITAQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGMQMWKSELCIRKTPC
EGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEL
TGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDAASSASSSSQSETPEPVETAS
PSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIM
GLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHF
IHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWV
NYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSEDNENSKSDEKGNQSEN
SEDPEPDRKKSGSACDNDMNCNNDGHSSSNPDSRDSDDSFEHSDFEHPKAAEDGFSALGP
MQIKVERYVESEADLRLQPCESLTSDSAKDSDSAGEAGAQASSKHQKRKRRRKRQKGGSA
SRRRLSSASSPGLDAGLVEPPRLLSSPHSASVLKIKTEIAEPINFDNDSSIWNYPPNREI
SRNESPYSMTKPPNSEHFPSPQGQGGSGGGNSSVGALHVAIPDSVLTPPGADGGAGRKTQ
FSSTAPVASDPLSPPLSASPREKHPGGGAGAGGGGPGASNSLLYTGDLEALQRLQAGNVV
LPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNAHAVNFVDVNSPGFG
LDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQMPGGNVFTTAEGLFSTLPFPVYSNGI
HAAQTLERKED
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatctttccggatttcagcgtgcaggtgacggccgcggcggccggcggggca
gccgctggggtaccggccggtgcgggcatggggagggccggcgccgcggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgaataactgcgcagcatcccctg
cccaaccaatcagaatgtaggaaaatctacagatatgacgggatctactgtgaatctacc
taccagaatttacaagcactgagaaaggagaaatccagagacgctgctcgctcccgccgg
gggaaagaaaatttcgagttctatgaattggccaagttgttgcctctcccagcagccatc
accagccagcttgacaaggcatccatcatccgactcacaatcagctatctcaaaatgagg
gactttgccaaccaaggggaccctccctggaacttgaggatggaaggcccgcccccaaac
acctcagtgaaagggatgcaaatgtggaaatctgaactctgcataagaaagacaccatgc
gaaggtgcccagcgaaggcgaagccccagcgcactggccatcgaagtatttgaagcacac
ctgggaagccacattttgcagtccctggatggcttcgtatttgcactaaatcaagaagga
aaatttttgtacatttccgaaaccgtctctatctacctaggcctctcacaggtggagctg
acaggaagcagcgtctttgactatgtccaccctggggaccatgtggagatggcagagcag
ctgggcatgaagctcccgcctgggcggggcctcctctcacagggcaccgcggaggacgca
gccagctcggcctcttcctcctctcagtcagagacccctgagccagtggagacagccagc
cccagtctgctaaccactgacaacaccctcgagcggtcctttttcatccgaatgaagtct
actctgaccaaacgtggcgtccacatcaagtcgtcaggctataaggtgattcacataaca
ggccggcttcgcctcagagtgtcgttgtcccatgggaggacggtccccagccaaatcatg
ggtctcgtggtggtggctcacgccttgcctccccctacaatcaatgaagtcagaattgac
tgccatatgtttgtcactcgagtaaacatggacctcaatatcatttactgtgaaaatagg
attagtgattacatggacctgacccctgtagacatcgtagggaaacgatgttaccacttc
atccatgccgaggatgtggaaggcatcaggcacagtcacctggacttgctgaataagggt
caatgtgtgaccaagtactatcgctggatgcagaaaaatggaggctacatctggatacag
tcaagtgccaccatagcgatcaatgctaagaacgcaaacgagaagaacatcatctgggtg
aattatcttcttagcaatcctgagtacaaggacacgcccatggacattgcgcagctcccg
cacttgccagagaagacttcagaatcctctgagacctccgactctgaatcagactctaaa
gacacctcagaggacaacgagaactcaaagtccgacgagaagggcaatcagtccgagaac
agcgaagatccagaacctgaccgcaagaagtctggcagtgcatgtgacaacgacatgaac
tgcaacaatgacggccacagctccagcaacccggacagccgcgacagcgacgacagcttc
gagcattcggactttgagcacccgaaggcagccgaggatggcttcagcgcgctgggcccc
atgcagatcaaggtggagcgctacgtggagagcgaggcagacctgcggctgcagccctgc
gagtcgctcacgtcggacagcgccaaggactcggacagcgcgggcgaggcgggtgcgcag
gcgtccagcaagcaccagaaacgcaagcggcggcggaaaaggcagaagggtggcagcgcc
agtcgccggcgcctgtccagcgcgtccagcccgggcctggacgctggcctggtggaacca
ccgcggctgctgtcatcgccgcacagcgcctcggtgctcaagatcaagacagagatcgcc
gaacccatcaacttcgacaatgacagcagcatctggaactacccgcccaaccgggagatc
tccaggaatgagtccccgtacagcatgaccaaaccccccaactcggagcacttcccgtcc
cctcagggccagggtggcagtggtggtggcaacagcagcgtaggagcactgcacgtggcc
atccccgactcggtcctcaccccaccgggcgccgatggcggggctggccgcaagactcag
ttcagcagcacggccccagtggcctccgacccgctgtcgcccccactctcggcatcccct
cgggaaaagcaccccgggggcggggcgggagccggcggaggtggccctggtgcgtccaac
tccttgctgtacactggggacctggaggccctgcagaggttgcaagcgggcaatgttgtg
cttcctctggtacaccgggtgacagggaccctggcggccaccagcacggccgcgcagagg
gtctacaccacgggcaccatccgctacgcgcctgctgaggttaccctggccatgcagggc
aacctgctacccaacgcgcatgctgttaacttcgtggacgttaacagccccggcttcggc
ctcgaccccaagacgcccatggagatgctctaccaccacgtgcaccggctcaacatgtca
ggaccatttggcggcgccgtgagcgcagccagcctcacacagatgccgggtggcaatgtg
ttcaccacggctgagggactcttctccacgctgcccttcccggtctacagcaacggcatc
cacgcggcacagactctggagcgcaaggaggattga
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