Arvicola amphibius (Eurasian water vole): 119819436
Help
Entry
119819436 CDS
T08327
Symbol
Itga6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04382
Cornified envelope formation
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp04514
Cell adhesion molecule (CAM) interaction
aamp04518
Integrin signaling
aamp04640
Hematopoietic cell lineage
aamp04810
Regulation of actin cytoskeleton
aamp04820
Cytoskeleton in muscle cells
aamp05145
Toxoplasmosis
aamp05165
Human papillomavirus infection
aamp05200
Pathways in cancer
aamp05222
Small cell lung cancer
aamp05410
Hypertrophic cardiomyopathy
aamp05412
Arrhythmogenic right ventricular cardiomyopathy
aamp05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119819436 (Itga6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119819436 (Itga6)
04514 Cell adhesion molecule (CAM) interaction
119819436 (Itga6)
04518 Integrin signaling
119819436 (Itga6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119819436 (Itga6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119819436 (Itga6)
04810 Regulation of actin cytoskeleton
119819436 (Itga6)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
119819436 (Itga6)
09158 Development and regeneration
04382 Cornified envelope formation
119819436 (Itga6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119819436 (Itga6)
09162 Cancer: specific types
05222 Small cell lung cancer
119819436 (Itga6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119819436 (Itga6)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
119819436 (Itga6)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
119819436 (Itga6)
05412 Arrhythmogenic right ventricular cardiomyopathy
119819436 (Itga6)
05414 Dilated cardiomyopathy
119819436 (Itga6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119819436 (Itga6)
04515 Cell adhesion molecules [BR:
aamp04515
]
119819436 (Itga6)
04090 CD molecules [BR:
aamp04090
]
119819436 (Itga6)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119819436 (Itga6)
Exosomal proteins of breast milk
119819436 (Itga6)
Cell adhesion molecules [BR:
aamp04515
]
Integrins
Integrin alpha subunits
119819436 (Itga6)
CD molecules [BR:
aamp04090
]
Proteins
119819436 (Itga6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
DUF4381
Motif
Other DBs
NCBI-GeneID:
119819436
NCBI-ProteinID:
XP_038193577
LinkDB
All DBs
Position
7:complement(12796432..12863058)
Genome browser
AA seq
1091 aa
AA seq
DB search
MAVAGQLCLLYLSAGLLARLGAAFNLDTREDNVIRKSGDPGSLFGFSLAMHWQLQPEDKR
LLLVGAPRAEALPLQRANRTGGLYSCDITSRGPCTRIEFDNDADPMSESKEDQWMGVTVQ
SQGPGGKVVTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLR
GHEKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVG
GETDHDESLVPVPANSYLGFSLDSGKGIMSKDDITFVSGAPRANHSGAVVLLKRDMKSAH
LLPEYIFDGEGLASSFGYDVAVVDLNADGWQDIVIGAPQYFDRGGEVGGAVYVYINQQGR
WNNVKPIRLNGTKDSMFGISVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSPTGINTK
PTQVLEGTSPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPVINILKTVTVTPNR
IDLRQKSLCGSPSGICLKVKACFEYSAKPSGYNPSISILGILEAEKERRKSGLSSRVQFR
NQGSEPKYTQELTLSRQKQRACMEETLWLQENIRDKLRPIPITASVEIQEPSSRRRVNSL
PEVLPILNSNEAKTVQTDVHFLKEGCGDDNVCNSNLKLEYKFCTREGSQDKFSYLPIQKG
IPELVLKDQKDIALEITVTNGPSDPRNPRKDGDDAHEAKLVATFPDTLTYSAYRELRAFP
EKQLSCVANQNGSQADCELGNPFKRNSSVTFYLILSTTEVTFDTTDLDINLKLETTSNQD
NLAPITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLG
KPLKNLGTATLNIQWPKEINNGKWLLYLVKVESKGLEQIVCEPHDEINFLKLKESHNSRR
KREISEKQIDDSRKFSLFSERKYQTLNCSVNVRCVNIKCPLRGLDSKASLVLRSRLWNST
FLEEYSKLNYLDILVRASIDVTAAAQNIKLPHAGTQVRVTVFPSKTVAQYSGIAWWIILL
AVLAGILMLALLVFLLWKCGFFKRSRYDDSVPRYHAVRIRKEEREIKDEKHNDNLEKKQW
ITKWSENESYS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcgggccagctgtgcctgctctacctgtccgcggggcttctggcccggctg
ggcgcagccttcaacctggacacccgggaggacaacgtgatccggaaatcgggggatccc
gggagcctcttcggcttctcgctcgccatgcactggcagttgcagccggaggataagcgg
ctgctgctagtgggggcccctcgggcagaagcacttccactgcagagggcgaacagaaca
gggggcctgtacagctgtgacatcacctctcggggaccttgcacgcggattgagtttgat
aatgatgctgatcccatgtcagaaagcaaggaagatcagtggatgggggtcaccgtccag
agtcagggtccaggaggcaaagtggtgacatgcgcgcatcgctatgaaaagaggcagcac
gtgaacaccaagcaggagtccagagacatcttcgggaggtgctacgtcctgagtcagaat
ctcaggatcgaggatgacatggatgggggagactggagtttctgtgacggccgactgaga
ggccatgaaaaattcggctcttgtcagcaaggggtcgccgcgactttcactaaagacttc
cattacattgtgtttggcgccccgggtacttacaactggaaagggattgttcgtgtagag
caaaagaataacactttttttgacatgaacatctttgaagatgggccctatgaagttggt
ggagagactgaccatgatgaaagtctcgtgcctgttcctgctaacagttacctaggcttt
tcattggactcagggaagggtattatgtctaaagatgacatcacttttgtgtctggtgct
ccacgagccaatcacagcggggctgtagtcttgctcaaaagagacatgaagtctgcacac
cttctccccgagtatatattcgacggagaaggcctggcttcttcgtttggctatgatgtg
gcggtggtggacctcaacgcagatgggtggcaagatatagttatcggagccccccagtat
tttgacaggggtggtgaagttgggggcgcagtgtacgtctacattaaccagcaaggcaga
tggaacaacgtgaagccaattcgtcttaatgggaccaaagattccatgtttggaatttct
gtaaaaaacatcggagacattaatcaagacggctatccagatattgctgttggagctccc
tatgatgatctggggaaggtttttatctatcacggatcaccaactggcataaataccaag
ccaacacaggttcttgagggcacctcaccttactttggctattcgatcgccggaaacatg
gacctggataggaattcctatcctgatgttgctgtcggttccctctcagactcagtaacg
atattcagatcccggccagtgattaacattctgaagactgtcacagtgacccctaacaga
attgacttgcgccagaagtccctgtgcgggtcacctagtgggatatgcctcaaggttaaa
gcctgttttgaatattctgcgaaaccctctggttataatccttcaatatcgattttgggt
atacttgaagctgaaaaagaaaggagaaagtctgggttgtcgtcacgagttcagtttcga
aaccaaggttctgagccaaagtatactcaggagctaaccctgagcaggcagaagcagcgg
gcgtgcatggaggagaccctctggctgcaggaaaacatcagagacaagctacgccccatc
cccatcacagcgtccgtggagatccaggagcccagctctcgccggcgggtcaattcactt
cctgaagttcttcctatcttgaattcgaatgaagccaagaccgtccagactgatgtacac
ttcttgaaggagggctgtggagacgacaatgtctgtaacagcaaccttaagctggagtat
aaattctgtacccgagaaggcagtcaagacaaattctcttaccttccaattcaaaaaggc
atcccggaattagttctaaaagatcagaaggatatagctctggaaataacagtgaccaac
ggcccttctgatccaaggaatcccagaaaagatggtgacgacgctcatgaggccaaactc
gtcgcgacattccctgacacgctcacatactcggcgtacagagaactgagggctttccct
gagaagcaactgagctgtgtcgccaaccagaacggctcccaagctgactgtgagctcggg
aaccctttcaagagaaattccagtgttactttttacctgattttaagtacaactgaggtc
acctttgacaccaccgatctggatattaatctgaagttggaaacaacaagcaatcaagat
aatttggctccaattacagcgaaagcaaaagtggttattgaactgcttttatcggtctcc
ggagttgctaaaccttcgcaggtgtattttggaggtacagttgtcggtgagcaggctatg
aagtctgaagatgaagtaggaagcttaatagagtatgaattcagggtgattaatttaggt
aaacctctgaaaaaccttggcacggcgactctgaatatacagtggcccaaggaaatcaac
aacggcaaatggttgctttatctggtgaaagtcgaatccaaaggtttggagcagatcgtt
tgcgagccacacgatgaaataaacttcctgaagctgaaggagtcgcacaactcaagaagg
aaacgggagatttctgaaaaacaaatagacgacagcaggaagttttctttattttctgaa
cgaaaataccagaccctcaactgcagcgtcaacgtgaggtgtgtgaacatcaagtgtccg
ctgcgtgggctggacagcaaggcctccctcgtgctgcgttccaggctgtggaacagtacc
tttctagaggaatattccaaactgaactacttggacattctcgtgagggcttctatcgac
gtgacggctgccgctcagaatatcaagctgcctcacgcgggcacacaggttcgcgtgacg
gtgtttccctctaagactgtagctcagtattcagggatagcttggtggatcatccttctg
gctgtccttgctgggattctcatgctggctctgttagtgtttttactgtggaagtgtgga
ttctttaagcgctctaggtacgatgacagcgtcccccgataccacgctgttcggatccgg
aaagaagagcgagagatcaaagacgaaaaacacaatgataacctcgaaaagaaacagtgg
atcacgaagtggagtgaaaatgaaagttactcatag
DBGET
integrated database retrieval system
