Arvicola amphibius (Eurasian water vole): 119819984
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Entry
119819984 CDS
T08327
Symbol
Bbs5
Name
(RefSeq) Bardet-Biedl syndrome 5 protein isoform X1
KO
K10473
kelch repeat and BTB domain-containing protein 5/10
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119819984 (Bbs5)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
119819984 (Bbs5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBL5
Kelch_1
BACK
Kelch_6
Kelch_KLHDC2_KLHL20_DRC7
BTB
Kelch_4
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_3
NANM
Kelch_5
bPH_3
Vps36_ESCRT-II
BTB_SANBR
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
119819984
NCBI-ProteinID:
XP_038194130
LinkDB
All DBs
Position
7:complement(14793750..14828440)
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AA seq
918 aa
AA seq
DB search
MSVLDVLWEDRDVRFDVSSQQMKTRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRIIWH
SLALPRVNLSIGYNCILNITTRTTNSKLRGQTEALYMLTKCNATRFEFIFTNLVPGSPRL
FTSVIAVHRAYETSKMYRDFKLRSAVIQNKQLRLLPQEHVYDKINGVWNLSSDQGNLGTF
FITNVRIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKIDPL
EKLHESVKEINSLHKVYSASPIFGVNYEMEEKPQPLEALTVEQIPDDVEIDSDDHTDAFV
AYFADGNKVPHRMDSQRELAEELRLYQSTLLQDGLKDLLEEKKFIDCTLKAGDRSLPCHR
LILSACSPYFREYFLSEIEEEKKKEVALDNVDPAILDLIIKYLYSASIDLNDANVQDIFA
LSSRFQIPSVFTVCVSYLQKRLAPGNCLAILRLGLLLDCPRLAISAREFVSDRFVQICKE
EDFMQLSPQELISVISNDGLNVEKEEVVFEAVMKWVRTDKENRAKSLSEVFDCIRFRLMA
EKYFKDHVEKDDIIKSNPEVQKKIKVLKDAFAGKLPEPSKNAEKAGTGEVNGDVGDEDLL
PGYLNDIPRHGMFVKDLILLVNDTAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQIY
VVGGLYVDEENKDQPLQSYFFQLDSITSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDL
QTEASLDSVLCYDPAAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRMFIY
NPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF
PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKEIRYA
SGASCLATRLNLFKLSKL
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgctggacgtgttgtgggaggaccgcgacgtgcgcttcgacgtgtcctcgcaa
cagatgaaaacaagacccggagaagtccttattgactgtttagattcgattgaagacaca
aaaggaaataatggggatagaggtcgactcttagtaacaaacttaagaatcatctggcat
tccttggcattacccagagtcaatctttctattggttacaactgcatattgaatattaca
acaagaactactaactccaaactacgaggccaaactgaagctctttatatgctgacaaaa
tgtaacgccacccgatttgagtttattttcacaaatctggttcctggaagccctagactt
tttacttctgtgatcgctgtgcacagagcatatgagacatctaaaatgtaccgtgacttt
aaactgagaagtgcagtcattcaaaacaagcagctgaggctgttaccacaagagcacgtg
tacgataagatcaacggtgtttggaatttatccagcgaccagggaaatttaggaactttt
tttattaccaacgtgaggattgtgtggcatgcaaacatgaacgacagttttaatgtcagc
ataccatatctgcagattcgttcaataaagattagagattcaaaatttggtttggctctt
gtcatagaaagctctcagcagagtggaggatatgttcttggctttaaaatagaccctctg
gaaaaactacatgaatcagttaaggagatcaactcacttcacaaagtctattctgccagc
ccgatatttggagtgaattatgaaatggaagaaaagccacagccacttgaagctctgaca
gttgaacagattccagatgatgtggaaatagactctgatgatcacacggatgcttttgtg
gcttattttgctgatggaaataaggttcctcacagaatggattcccagcgggagcttgca
gaggaactccggctttaccagtccacccttcttcaggatggtctaaaagatctcctggaa
gagaaaaaattcatcgattgcaccctcaaagcaggtgacagaagtcttccttgccacaga
ctgatattgtcggcttgtagtccttacttccgtgagtatttcttatctgaaattgaagag
gagaaaaaaaaggaggtcgcgctagataacgtggatcctgctatccttgatttgatcatc
aaatacctgtactctgccagtatcgatctcaatgatgcaaacgtgcaagacatcttcgcc
ctgtccagccgcttccagatcccctcagtcttcaccgtctgtgtgtcttaccttcagaaa
cgactggctccgggtaactgtctggccatcctaagattgggtcttctccttgactgccca
agactcgccatttctgcccgggagtttgtctcagatcgttttgtgcagatttgtaaggag
gaagacttcatgcagctgtctccgcaggagctgatctccgtcatttcaaatgacggtctc
aacgtagaaaaggaggaagtggtgtttgaggccgttatgaaatgggtgcggacagacaaa
gaaaacagggcgaaaagtcttagcgaagtgtttgattgtattcgtttccgccttatggca
gaaaaatacttcaaagatcacgtcgagaaagatgacataattaaaagcaaccccgaagtc
cagaagaaaattaaagttctaaaagatgcttttgcaggcaaactcccggaacctagcaaa
aacgctgagaaggcagggactggcgaggtgaacggcgatgtcggggatgaagacttactt
cctggttacctcaatgatattcccagacatggaatgttcgttaaagatctcattctcttg
gtcaatgacacagctgcagtggcttacgaccccatggaaaacgagtgttaccttaccgcc
ttagcagagcagatccccagaaatcattccagtatcgttacccaacaaaatcagatctac
gtcgtcggagggctgtatgtggatgaagaaaataaggatcaacccctacagtcctacttc
ttccagcttgatagcataacgtctgaatgggtcggacttcctcctctaccatcagccagg
tgtctctttggtttgggagaggtggacgacaaaatctatgtggttgccggcaaagacctc
caaacagaagcttcgctagactccgtcctatgctatgaccccgcggctgcaaaatggagt
gaagtgaaaaatcttcctattaaagtttatggccataatgtgatttcccataacgggatg
atctactgtctaggcggaaagacagacgacaaaaagtgtaccaacagaatgtttatctac
aaccccaaaaagggagactggaaagatctggctccgatgaagacccctcgttccatgttt
ggagtggcaatccataaaggcaaaattgtaatcgcagggggtgtcaccgaggacggtctc
tctgcttcagttgaagctttcgacctgaagaccaataaatgggaagtgatgacggaattt
ccccaagaaagaagctccatcagtctggtcagcttggctggatccctgtacgccatcggt
ggttttgcaatgatccaactggaatcgaaagagtttgcacccactgaagtcaatgacata
tggaagtatgaagatgataaaaaagaatgggctgggatgttgaaggaaatacgttatgct
tccggagctagttgcctagcaacacgcttaaatctgttcaaactgtctaaactataa
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