Arvicola amphibius (Eurasian water vole): 119820356
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Entry
119820356 CDS
T08327
Symbol
Nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119820356 (Nup43)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119820356 (Nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119820356 (Nup43)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119820356 (Nup43)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119820356 (Nup43)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119820356 (Nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML_2
WD40
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD_LRWD1
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_SPT8
T4_tail_cap
Beta-prop_CAF1B_HIR1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
119820356
NCBI-ProteinID:
XP_038194504
LinkDB
All DBs
Position
8:17100654..17111630
Genome browser
AA seq
380 aa
AA seq
DB search
MEEIYAKFVSQKISKTRWRPVPSGSLQTAETFATGSWDNEENCVSLWSIGDFGNLDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVNQRWPAAHH
HTGPGSPSYSSAPCTGIVCDNPEIVTVGEDGRINLFRVDHKEAVRTIDNADSSTLHAVTF
LRTPEIVTVNSIGQLKIWDFRQQGSEPCQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDASTNGSEKSS
LFHQGGRSSTFLSHSISNQATVHQSLISSWLSTDPAKDRIEITSLLPSRTLSVNSLDVLG
PCLVCGTDAEAIYVTRQLFS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatttatgctaagttcgtgtctcagaaaatcagcaaaacccgctggcggccg
gtgccttccggaagcctgcagaccgcagagaccttcgctacgggttcttgggacaatgag
gaaaattgcgtttcactgtggtctattggagattttggaaatttggattctgacggaggc
tttgaaggagaccatcaactgctgtgcgatatcagacatcatggtgatgtcatggattta
cagttttttgaccaggaaagaattgtagctgcttcatcaacaggatgtgtaacagtgttc
cttcaccatccaaacaaccagactctgtcagtcaatcagcggtggcctgcagctcaccac
catacaggtcccggcagtccttcctatagcagtgcaccatgtacagggattgtgtgcgac
aacccagaaattgttactgttggagaagatgggcgaataaatctcttcagagttgaccac
aaggaggctgtaagaactatagataacgcggacagcagtacactccatgctgtaaccttc
ctccgaactcctgagattgttacagtaaactccattggacagttaaaaatatgggatttc
agacaacaaggaagtgagccctgtcagatattatcactgactggtgaccgagtgccactc
cactgtgttgacagacatcccaaccagcagcatgttgtagctactgggggccaggacggg
atgttgagtatttgggatgttagacaaggcaccatgcccgtatctttacttaaggctcat
gaggctgaaatgtgggaggttcacttccacccatccaatccagatcatctgtttacttgt
tctgaagatggatccctctggcactgggatgcctccacaaatggatccgaaaagtcttct
ctctttcaccaaggaggaagaagtagcactttcctgtctcatagcataagtaaccaggcc
actgttcaccagtctctaataagttcctggctcagcacagatcctgccaaagaccgcatt
gaaatcacaagcttgcttcccagcagaactctgtctgtaaacagtttggatgttttaggt
ccctgtcttgtttgtgggactgatgcagaagccatttatgttaccagacaactattttca
tga
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