Arvicola amphibius (Eurasian water vole): 119820426
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Entry
119820426 CDS
T08327
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119820426 (Xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119820426 (Xrcc5)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
119820426 (Xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
CdsD_PD1
Motif
Other DBs
NCBI-GeneID:
119820426
NCBI-ProteinID:
XP_038194655
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All DBs
Position
8:complement(118968099..119064727)
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AA seq
732 aa
AA seq
DB search
MAWSGNKAAVVLCIDVGAAMGNSFPGEESPFEQAKKVMTMFVQRQVFSESKDEIALVLFG
TDNTDNALAGEDQYQNITVRRHLMLPDFDLLEDIESKIQPGSRQADFLDALIVCMDLIQR
ETIGKKFGKKHIEVFTDLSSPFSQDQLDVIICNLKKSGISLQFFLPFPICKCDEAGSRGD
GDLGLAHRGPSFPQKGITKQQEEGICMVRRVMMSLEGEDGLDEIYSFSESLRQLSVFKKI
ERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKVKKSWTVVDARTLKKEDVQKETVYCLNDD
DETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVHRRFFMGYQ
VLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYAYDKRANPQVGVAFPYIKDAYECLV
YVQLPFMEDLRQYMFSSLRNNKKCTPTEAQLSAVGDLIDAMSLVRKSEEEDTVEDLFPVS
KIPNPEFQRLFQCLLHRALHPQDRLPPIQPHILSMLNPPPEMKAKCEIPLSKVKTLFPLT
EAVKKKYQVTAQDIFQDNHEEGPAAKKCKTEKEDTHINISSLAEGNVTKVGSVNPVENFR
VLVRQKIISFEEASLQLISHIEQFVDTNEILYFLKSMECIKAFREEAMQFSEEQRFNSFL
KDLREKVEIKQLNHFWEIVVQDGVTLITKDESPGSSVTAEEATEFLAPKGKAKEDAAGLE
EGGDVDDLLDMI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtccggtaataaggcagctgttgtgctgtgtatcgacgtgggggctgccatg
ggtaactcctttcctggtgaggaatccccgtttgaacaagcaaagaaagtgatgaccatg
tttgtccaacgacaggtattttccgagagcaaggatgagattgctttagtcctctttggt
acagacaacactgataatgcccttgctggtgaggaccagtatcagaacatcacagtgcgc
agacacctgatgctaccagattttgatttgctggaagacattgaaagcaaaatccagcca
ggctctcgacaagctgacttcctggatgccttgattgtgtgcatggatctgattcagcgg
gaaaccatagggaagaagtttgggaagaagcacattgaagtgttcactgacctcagcagc
ccgttcagccaagatcaactagatgtcatcatttgtaacttgaagaaatctggcatctcc
ctgcagttctttctgccttttcccatctgcaagtgcgatgaggctgggagcagaggagat
ggtgacctgggcttggcccaccgtggaccgtcctttcctcagaaagggattactaagcag
caagaggaaggcatttgcatggtgcgaagggtgatgatgtctctggaaggtgaagatggg
ctggatgaaatctattccttcagtgagagtctacggcagctgtcggtctttaagaagatt
gagaggcgctccatgccctggccctgccagctgaccatcggccccaatttgtctataaag
attgtagcctataaatcgatcgtacaggagaaggttaaaaagagctggacagttgtggat
gcaagaaccctaaagaaggaagatgtacagaaagaaactgtttattgcttaaatgacgat
gacgaaaccgaagtttccaaagaggacactattcaagggttccgctacggaagcgatata
attcctttttctaaagtggatgaggaacaaatgaaatataaatcggaggggaagtgcttc
tctgttttgggattttgtagatcttctcaggtccatagaagattctttatgggatatcaa
gttctaaaggtctttgcagcaaaagatgatgaggcggcggctgtagccctttcttccctt
attcatgctttggatgaattaaacatggttgccatcgttcgatatgcttatgacaaaaga
gcgaatcctcaagttggtgtagcttttccttatattaaggatgcctatgagtgtttagtt
tatgtgcagctgcctttcatggaagacttgcggcaatacatgttttcatcactgcgaaac
aataagaagtgcactcccacagaggcacagctgagtgctgttggcgatctgattgatgct
atgagtttggtaaggaagagtgaggaagaagacaccgttgaagacttgtttccagtctcc
aaaattccaaatcccgaatttcagagactattccagtgtctgctgcaccgggccttacac
ccccaggaccgtctgcccccaattcagccgcacattttgagtatgctcaatcccccccct
gagatgaaagccaagtgtgagattcctctttctaaagtaaagacccttttccctctgacg
gaagccgtcaagaaaaagtatcaagtgactgctcaggacattttccaagacaatcacgaa
gaggggcctgctgctaaaaaatgtaagactgagaaagaagacactcacatcaatatttcc
agcctggctgaagggaatgtcaccaaggttggaagtgtgaatcctgttgaaaacttccgt
gttctagtgagacagaagattatcagctttgaggaagcaagcctccagctaataagtcat
attgagcagtttgtggataccaacgaaatcctgtattttctgaagagtatggaatgcatc
aaagctttccgggaggaggccatgcagttttcagaagagcagcgcttcaacagtttcctg
aaagaccttcgagagaaagtagaaattaaacaattaaatcatttctgggaaattgttgtt
caggatggagttactttgatcaccaaggatgaaagccctggaagctctgtcacagctgag
gaggccacagagtttctagcccccaaaggcaaagccaaggaagatgcagcaggacttgaa
gaaggtggtgatgtggatgatttactggacatgatatag
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