Arvicola amphibius (Eurasian water vole): 119820512
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Entry
119820512 CDS
T08327
Symbol
Psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03050
Proteasome
aamp05010
Alzheimer disease
aamp05012
Parkinson disease
aamp05014
Amyotrophic lateral sclerosis
aamp05016
Huntington disease
aamp05017
Spinocerebellar ataxia
aamp05020
Prion disease
aamp05022
Pathways of neurodegeneration - multiple diseases
aamp05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119820512 (Psmd1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
119820512 (Psmd1)
09164 Neurodegenerative disease
05010 Alzheimer disease
119820512 (Psmd1)
05012 Parkinson disease
119820512 (Psmd1)
05014 Amyotrophic lateral sclerosis
119820512 (Psmd1)
05016 Huntington disease
119820512 (Psmd1)
05017 Spinocerebellar ataxia
119820512 (Psmd1)
05020 Prion disease
119820512 (Psmd1)
05022 Pathways of neurodegeneration - multiple diseases
119820512 (Psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aamp03051
]
119820512 (Psmd1)
Proteasome [BR:
aamp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
119820512 (Psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
HEAT
PA26
Tim54
Motif
Other DBs
NCBI-GeneID:
119820512
NCBI-ProteinID:
XP_038194844
LinkDB
All DBs
Position
8:complement(105980512..106058354)
Genome browser
AA seq
953 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTVLESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDPMETE
EKTGSALAGKTPDTSPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTETCRY
QPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcagccgctggaattatttctcttctggatgaagaagagccacagcttaag
gaatttgcactacacaaattgaatgcagtcgttaatgacttctgggcagaaatttctgag
tctgtagacaaaatagaagttttatatgaagatgaaggtttccggagtcggcagtttgca
gccttggtggcatctaaagtattttatcatctgggggcttttgaggagtctctgaattat
gctcttggagcaggtgacctcttcaatgtcaatgataattctgaatatgtggaaactatt
atagcaaaatgcattgatcattataccaaacagtgtgtagaaaatgcagatttgcctgaa
ggagaaaaaaagccaattgaccagagattggaaggcattgtgaataaaatgttccagcga
tgtcttgatgaccacaagtacaagcaagcgattggcattgctttggagaccagaagacta
gatgtctttgagaagactgtactggaatctaatgatgtcccaggaatgctagcttacagc
ctcaagctctgcatgtctttaatgcagaataaacagtttcggaataaagtattgagagtc
ctggttaagatctacatgaacttggaaaagcccgatttcatcaatgtttgtcagtgctta
attttcttagatgatcctcaggccgtgagtgatatcttagaaaagctggtaaaggaagac
aacctgctgatggcctatcagatttgttttgatttgtatgaaagtgctagccagcagttt
ttgtcatctgtaatccagaatcttcgaactgttggtactcccattgcttctgtgcctgga
tctactaatacgggtactgtgccaggatcagagaaagacagtgaccctatggaaacggag
gagaagacaggcagtgcactggcaggaaagacaccggatacgagtccagaacccaaggac
cagacactgaaaatgattaaaattttaagtggtgaaatggctattgaattacacctgcag
tttctcatacgaaataacaatacagacctcatgatcctgaaaaacacaaaggatgcagta
cgaaattctgtatgtcatacagcaactgtaatagcaaactcattcatgcactgtggtact
accagtgaccagtttcttagagataacttggagtggttggccagagccactaactgggcc
aaatttactgcaactgccagcttgggtgtaatacataagggccatgagaaggaagcatta
cagttaatggcaacataccttcccaaggatacttctccaggatcagcctatcaggaaggt
ggaggtctctatgcattgggtctcattcatgccaatcatggtggagacataattgactat
ctccttaatcagctcaagaatgccagcaatgatattgttagacatggaggcagtctgggc
cttggtttggctgcaatgggaactgctcgtcaagatgtgtatgatttgctgaaaacaaac
ctttatcaggatgatgctgtgacaggggaggcagctggcctggccttaggtttggttatg
ttaggttctaaaaatgcccaggctattgaggatatggttggctatgcacaagaaactcag
catgagaagattcttcgtggtctagcagttggcattgcattagtgatgtatggaaggatg
gaagaggctgatgctctcattgaatctctctgccgtgataaggacccaattcttcgaagg
tctggaatgtatactgtagccatggcttattgtggctctggtaacaacaaagctattcga
cgcttgctacatgttgctgtgagtgatgttaatgatgatgtcaggagagcagcagtagaa
tcgcttggcttcattttattcaggacgcctgaacagtgtccaagtgttgtttctttatta
tcagagagttacaaccctcatgtgcgctatggagctgcgatggccctggggatctgctgt
gctggcacaggaaacaaggaagcaattaatttactagaaccaatgacgaatgatcctgtg
aactacgtgaggcaaggggctctgatagcgtcagctctcatcatgatccagcagaccgaa
attacttgtccaaaggttaatcagttcaggcagctgtattccaaagtcatcaatgacaag
catgatgatgtcatggccaaatttggcgctattctggcccaaggcatactggatgcaggt
ggtcataatgtcacaatctccttacagtcccggactgggcacactcatatgccttctgtg
gttggcgtccttgtcttcacccagttctggttctggtttcccctttcacacttcttgtcg
ttggcttatacccctacctgtgtcattggccttaacaaggacttaaagatgccgaaagtt
caatataaatcaaattgtaaaccatccacatttgcatatcctgcccctctggaagtacca
aaagaaaaagaaaaggaaaaggtttctactgctgtgttgtcgattactgccaaagctaaa
aaaaaagaaaaagaaaaagaaaaaaaagaggaggagaagatggaagtggatgaagcagaa
aagaaggaagagaaagaaaagaaaaaagaacctgaaccaaactttcagctgttggataat
ccagcacgagttatgcctgcccagctaaaggtgttaacaatgacagagacctgcagatac
cagcctttcaaaccactctccattggaggcatcataattctgaaagacaccagtgaagac
attgaagaacttgtggaacctgtggcagcacatggcccaaaaattgaagaggaggagcaa
gaaccagagcccccagaaccatttgaatatattgacgattaa
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