Arvicola amphibius (Eurasian water vole): 119820567
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Entry
119820567 CDS
T08327
Symbol
Ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119820567 (Ascc3)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119820567 (Ascc3)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
119820567 (Ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
AAA_30
T2SSE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
119820567
NCBI-ProteinID:
XP_038194962
LinkDB
All DBs
Position
8:61035961..61329170
Genome browser
AA seq
2200 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVADLKLKRSKLHEQVLDLGPTWKKIVKFLNEKLEK
NKMQSINEDLKDILQAAKQIVGADIGREEIESGAAFLFMTFHLTDSVGHMETKAIRQMFG
PFPLSSATTACNATNRIISHFSQDDMTALVQMAENQCSDRVFFGKNLAFSFDMHDLDHFD
ELPVNGEAQKTISLDYKKFLNEHFQEHYTPELKPIEKTNGTFLWCEVEKYLNATSKEMTE
APRIEDLCCTLYDMLASVKSGDELQDELFELLGPEGLDLIEKLLQNRITIVDRFLNSSND
HKFQVLQDSCKKILGENAKPNYGCQVTIQSEQEKQLMKLYRREEKRISRQKKTGEDGEVS
GEGLLSFDPKELRIHREQALLNARSAPILGRQRDMEVEKIRYPHVYDSQVEARETSAFIA
GAKMILPEGIQRENTKLYEEVRIPYSEPMAVGFEEKPVYIQDLDEIGQLAFKGMKRLNRI
QSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMK
ALAAEMTNYFSKRLEPLGIVVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVA
LSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATF
LHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVWKQVKAGHQVMV
FVHARNATVRTAMSLIERAKNSGQISYFLPTQGPEYGHALKQVQKSRNKQVRELFLDGFS
IHHAGMLRQDRNLVENLFSNGHIKVLICTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVD
LGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPIESQFLESLADNLNA
EIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGQK
LDKAKMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAEE
FDQIKVREEEVEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDSA
YVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTR
LEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVSL
NIHPDFSWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEPQLLVFTIPIF
EPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCKAYEA
LYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAP
LKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAQADLIVTTPEKWDGVSRSWQN
RNYVQQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLA
DWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLI
FVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMENIIGTIRDSNLKLTLAFGIGMHH
AGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPI
TDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIA
GGTITSKQDAMDYITWTYFFRRLIMNPSYYSLDDVSQDSMNKFLSHLIEKCLVELELSHC
IEVGEDNRSIEPLECGRIASYYYLKHKTVKMFKDRLKPECSIKELLSILSDAEEYTDLPV
RHNEDHTNSELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQA
LRVCQAMLDVAASQGWLVTVLNITHLVQMVIQGRWLKDSSLLTIPNIEQHHLHLFRKWKP
PVKGPQARRTSIECLPELIHACEGKDDIFSSMVENELQSAKTKQAWNFLSRLPVINVGIS
VKGSWDDSVEGHKELSISTLTADKRDDNKWIKLHANQQYVLQVSLQRVHFGFHKGKHESY
AVTPRFPKVKDEGWFLILGEVDKREMIASKRVGFVRTHHDASLSFFTPEIPGRYIFTLYL
MSDCYLGLDQQYDIHLNVTKAKLSTQVSTETSDAFTDLAV
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atggctttacctcggctcacaggagctttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtagctgacttaaagctgaaacgatccaaacttcatgaacaagtt
ttagatttgggccccacatggaagaagatagtcaaatttttgaatgaaaaactagagaag
aataaaatgcaaagtataaatgaagacttaaaagatatactgcaagctgcaaaacaaatc
gttggagcagatattgggagagaagaaattgaaagtggagctgcatttctctttatgaca
tttcacttgacggattctgttggtcacatggagacaaaagccatcagacagatgtttggt
ccctttccattgtcatctgctactacagcttgtaatgccactaatcgaattatttctcat
tttagtcaagatgatatgactgctcttgtccagatggcagaaaaccagtgtagtgataga
gtgttttttggtaaaaacttagcattttcctttgatatgcatgatctggaccactttgat
gaattgccagtaaatggcgaagcccagaaaactataagcttagactacaagaaattcttg
aatgaacattttcaggagcactacaccccagaactcaaacccatagaaaagacaaatggt
acctttttgtggtgtgaagttgagaagtacttaaatgcaacctcaaaggaaatgactgaa
gcaccaagaattgaagatctctgctgtaccttgtatgacatgcttgcttctgttaaaagt
ggtgatgaacttcaggatgagctttttgagttgctgggacctgaaggactcgatctgatt
gagaagctcctccagaacagaattacaattgtagatcgatttcttaattcctcaaatgat
cataagtttcaggttcttcaagatagttgtaaaaaaattttaggtgagaatgccaagcct
aattatggttgtcaagtcactattcagtctgaacaagaaaaacagttaatgaaactgtat
cgccgtgaagaaaaaaggatttccagacaaaaaaagactggagaagatggggaggtttct
ggggaaggacttttgtcctttgatcctaaggaactccggatacacagagaacaggcactt
ctgaatgctagaagtgctccaattctgggcaggcagagagacatggaggttgaaaaaatc
cgttatccccatgtttatgattcccaggttgaggcccgagaaacatcagcattcattgct
ggtgccaagatgattttaccagaaggaattcaaagagagaataccaagctatatgaagaa
gtacggatcccttatagtgaaccaatggcagttggctttgaggaaaagccagtttatatc
caagacttagatgagattggacagttggcttttaaaggaatgaagagactcaatagaatc
cagtccatagtatttgaaactgcttacaacaccaatgagaacatgctgatttgtgcccct
accggagctgggaagaccaatatcgcgatgcttacagttttacatgaaatccggcaacac
tttcaacaaggtgttattaaaaagaatgagtttaagattgtgtatgttgctccaatgaaa
gccttggcagctgaaatgacaaattacttcagcaaacgtctggagccacttggcattgtt
gtgaaagaactgactggagatatgcaattatcaaaaagtgaaattttaagaactcagatg
cttgtgaccacaccagaaaagtgggatgtagtaacaaggaagagtgttggagatgttgct
ctttctcaaattgtgaaactcctgattcttgatgaagttcacttgctgcatgaagaccgg
ggcccagtgctagaaagcatagttgcgaggaccttaaggcaggttgaatccacacagagt
atgataagaattcttggactgtctgcaaccttacccaactacctcgatgttgctacattt
ttgcatgttaacccctacattggacttttttacttcgatggccgttttcgacccgtacct
cttggacagacatttttaggtattaaaagtgcaaataagatgcaacagttgaataacatg
gatgaagtatgctatgaaagtgtttggaaacaagtaaaagctggacaccaggttatggta
tttgtacatgctcgcaatgccactgttcggacagctatgtctctaatagaaagagcaaaa
aatagtggccagatttcctattttctgcctacccaaggaccagagtatggacatgcatta
aaacaggtgcaaaagtcaagaaataagcaagtgcgagaattattcttggatggctttagc
attcaccatgcaggaatgcttcggcaagacaggaatttggttgaaaacttgttttcaaat
gggcatatcaaagtcctaatctgtacagccacattagcctggggtgtcaatcttcctgcg
catgctgttattattaagggaacacaaatatatgctgccaaaagaggctcctttgttgac
cttggaattttagatgtcatgcagatatttggccgagctggacgaccacaatttgacaaa
tttggggaaggaatcattataacgacacatgataaactcagccattacctcagtttactc
actcaacaaaacccaattgagagtcagtttctggaaagccttgcagataacctaaatgct
gagattgctctgggaacagttaccaatgtggaagaagcagtgaagtggataagttacact
tacctctatgtgcggatgagagcaaatccattagcttatggcatcagtcataaagcatac
cagattgacccaacattaagaaaacatcgagaacagctagtcattgaagttggacaaaag
ctggataaagctaagatgatccgttttgaagagcgaactggttatttttcctccactgat
ttgggtagaactgccagccactactatattaaatacaacaccatcgagacatttaatgaa
ctttttgatgcacacaaaacagaaggtgatatctttgctattgtatccaaagctgaagaa
tttgatcaaattaaggtgagagaagaggaagtagaggagctagacgccttgttaaacaat
ttctgtgaactctcagctcctggaggtgtggaaaatagttatgggaaaataaacatcttg
cttcagacctacattagccgaggagagatggacagtttctccctcatatcagattctgcc
tacgttgcccagaatgcagctagaattgtccgtgctctctttgaaattgcactgaggaaa
cgttggcctactatgacctacaggcttctgaacctgagtaaagtcatcgacaagagactc
tggggttgggctagccctttgagacagttttctgtgttaccaccacacattctgacaaga
ttagaagaaaaaaaccttactgtggataagctcaaagacatgagaaaggatgaaataggt
cacattttgcatcatgtgaatattggactgaaggttaaacagtgtgttcatcagattcct
tctgttacaatggaagcttccattcagcccatcacacggactgtcctccgagtatcactg
aatatccacccggatttctcttggaatgatcaggtccatggaacagttggggaaccctgg
tggatttgggtagaagatcctacaaatgaccatatttatcattcagagtactttttagct
cttaaaaagcaggttattaataaagaacctcaacttctggtatttacaatccctattttt
gagcctttgccctctcagtactacattcgagcagtgtctgatagatggctaggagctgag
gccgtttgcattatcaactttcaacatctgattctaccagagagacatcctcctcataca
gaattgttggaccttcagcctttaccagtcacagctttggggtgcaaagcatatgaagct
ctatataacttcagccacttcaacccagtccagacacagatattccacacactgtatcac
acggactgtaatgtcctgcttggagctcccactggatcaggaaagacggttgcagccgaa
ctggccattttcagagtcttcaacaagtatcccacttcaaaggcagtgtatattgcaccc
ctaaaagctctagtacgggaaaggatggatgattggaaaattagaatagaagaaaaactt
ggtaaaaaagttattgaattgacaggggatgtgactccagacatgaaatccattgctcag
gctgaccttattgtcactacaccagaaaagtgggatggagtcagtcgaagctggcagaat
aggaactacgttcagcaggttaccattctcatcatagatgagatccatctgcttggggaa
gagagaggtccagttctagaagttattgtatctcgaacaaactttatctcatcacacaca
gagaagcctgttagaatagttggattgtccactgcactagctaatgccagagaccttgct
gactggctcaacattaagcagatgggtttgttcaacttccgaccatcagttcgcccagtt
cctctggaagtccacattcaaggtttcccaggtcagcattactgcccacgcatggctagt
atgaacaagcctgcatttcaggcaattagaagtcattctccagccaagcctgttttgata
tttgtctcatcaagacgtcaaactcgacttactgctttagagttgatagcctttctggct
actgaagaggatccaaaacagtggttgaatatggatgaacaagagatggagaacatcatt
gggacaatacgagattccaacctgaagctgactctagcttttgggataggaatgcatcat
gctgggctacatgaaagagaccgaaaaactgtagaagaactatttgtgaactgtaaagtc
caggttcttattgctacaagcacattagcatggggtgtaaactttccagctcacttagta
attattaaaggaactgaatattatgatggaaaaacaagacgttatgtggactttcccatt
acagatgtgctgcaaatgatggggagagctgggagacctcagtttgatgaccagggcaaa
gctgtaattcttgttcatgatataaaaaaagatttttataaaaaatttctttatgaacct
ttcccagtcgaatcaagcttattaggagtgctttcagaccacttaaacgcagagattgct
ggaggtacaataacatctaagcaagatgcaatggattatatcacatggacttactttttc
cgacgtcttatcatgaaccctagctactacagcttggatgatgtcagccaggactccatg
aacaagttcttgtcacatctgattgagaagtgtctggttgagttggagctttcccactgc
attgaagttggagaggataaccgcagcattgagccactagaatgtggtcgaattgcctcc
tattactacttgaagcacaaaacagtcaaaatgttcaaggaccgtttgaaacctgagtgc
agcattaaagaactgctttcaattctgagtgatgcagaagagtacacagacttgccagta
agacacaatgaggaccacacaaacagcgaattggcgaaatgtcttcccattgaattaaat
cctcactcatttgacagtcctcacaccaaggcgcatctcttgcttcaggcacatctcagc
cgagccatgctgccctgcccagattatgacactgataccaaaacggtcttagaccaagct
ctcagagtatgtcaggccatgttggatgtggctgcaagccagggctggctggtgactgtc
ctgaatatcacccacctggttcaaatggtgatacaaggccggtggctaaaggattcttct
cttcttacaataccaaacatagaacagcaccatcttcaccttttcaggaaatggaaacca
ccagtaaagggcccacaagctaggcgaacatccatcgaatgccttcctgagctgatccat
gcctgtgaagggaaagacgatatattcagttccatggtggagaacgagttacagtcagcc
aaaacaaagcaggcatggaatttcttatctcgcttgccagtgataaatgttggcataagt
gttaaaggctcatgggatgactcagttgaaggacataaagaactctccatttcaactctg
acagcagacaagcgagatgacaacaagtggatcaagttgcatgctaatcagcagtatgtg
cttcaagtcagcctgcagagagtccattttgggttccacaagggaaaacacgagagttat
gcagttactcctcgatttcccaaagtaaaagatgaaggatggtttttgatattaggagag
gtggataagagagaaatgattgcttcaaaacgagtaggatttgttcgaactcatcatgat
gcctcgctctctttctttactcctgaaatacctggaagatacatcttcaccctatatctc
atgagtgactgttacctcggcctagaccagcagtatgacattcatctcaatgtgaccaaa
gcaaaactttcaacacaggtcagcacagagacctccgatgccttcactgacttggcagta
tag
DBGET
integrated database retrieval system
