Arvicola amphibius (Eurasian water vole): 119820601
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Entry
119820601 CDS
T08327
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03010
Ribosome
aamp04120
Ubiquitin mediated proteolysis
aamp04137
Mitophagy - animal
aamp04140
Autophagy - animal
aamp05012
Parkinson disease
aamp05022
Pathways of neurodegeneration - multiple diseases
aamp05167
Kaposi sarcoma-associated herpesvirus infection
aamp05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
119820601
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119820601
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119820601
04137 Mitophagy - animal
119820601
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
119820601
05167 Kaposi sarcoma-associated herpesvirus infection
119820601
09164 Neurodegenerative disease
05012 Parkinson disease
119820601
05022 Pathways of neurodegeneration - multiple diseases
119820601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aamp03011
]
119820601
04121 Ubiquitin system [BR:
aamp04121
]
119820601
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119820601
Ribosome [BR:
aamp03011
]
Ribosomal proteins
Eukaryotes
Small subunit
119820601
Archaea
119820601
Ubiquitin system [BR:
aamp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
119820601
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119820601
Exosomal proteins of colorectal cancer cells
119820601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Dsc3_N
FAD_binding_6
Ubiquitin_5
HemeBinding_Shp
Motif
Other DBs
NCBI-GeneID:
119820601
NCBI-ProteinID:
XP_038195019
LinkDB
All DBs
Position
8:complement(130344370..130344876)
Genome browser
AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLKIEPSDTIENVKAKIQDKEGISPDQQRLIFTGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRREC
PSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaagacccttacggggaaaaccatcacgctcaagattgaaccctcg
gacactatagaaaatgtcaaggccaagatccaggataaggaaggaatttctcctgatcag
cagaggctgatcttcactggcaagcagttggaagatggccgtactttgtccgactacaac
atccaaaaggagtccacccttcatctggtgttgagacttcgtggtggtgctaagaagagg
aagaagtcttacaccactcccaagaagaataagcacaagagaaagaaggtgaagctggct
gtactcaagtactataaggtggatgaaaatggcaaaattagtcgtcttcgtcgagagtgt
ccttctgatgaatgtggtgctggagttttcatggctagccactttgacagacattactgt
ggcaagtgctgtctgacttactgcttcaacaagccagaagacaagtaa
DBGET
integrated database retrieval system
