Arvicola amphibius (Eurasian water vole): 119820740
Help
Entry
119820740 CDS
T08327
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119820740 (Npas1)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119820740 (Npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
119820740
NCBI-ProteinID:
XP_038195225
LinkDB
All DBs
Position
8:complement(70963484..70982297)
Genome browser
AA seq
595 aa
AA seq
DB search
MATPYPRSSGRGEVKCGGDRGASVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARWRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAATPGPPTPPSVSSSSSSSSSSSLVDTPEIEASPTEASP
TFRVQERSFFVRMKSTLTKRGLNVKASGYKVIHVTGRLRSRALGLVALGHTLPPAPLAEL
PLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQSHLDLL
DKGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSAGEHHVLWVSHVLSHAEEGQTPLDAF
QLPATVSHEDPSSPGPESTEDEPPVDPKQAASVDQDKDKNPQTRGKRIKVEPGPKEARGS
EDSGDEELSDPPATPRPEFTSVIRAGALKHDAVLPWGLTTPGEPSPALLHAGFLPPVVRG
LCTPGTIRYGPAELSLMYPHLHRLGPGPTLPEAFYPTLGLPYPGPTGTRVQRKGD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccctatcccaggagcagcggccgaggtgaagtcaagtgcgggggagaccgt
ggagccagcgtcccctgggatttcctgcccgggctaatggtcaaggccccaccagggccc
tgcctgcaggcacagcgcaaagaaaagtcccgcaacgcagcgcgctggcggcgcgggaag
gaaaatctagagttcttcgagctggccaagctgcttcctctgcccggtgccatctccagc
caactggacaaggcgtccatcgtgcgtctcagtgtcacttacctccgcctgcgtcgcttc
gctgcgctaggggcgccgccctgggggttgcgagccgtcgggcctccggctggcctcgcc
ccaggccgccgaggccctgtggctctggtctctgaagtttttgagcaacacctgggtgga
cacatccttcagtctctggatggcttcgtgttcgccttgaaccaggaaggaaaattcctc
tacatctcagagactgtgtccatctacctgggtctctcacaggtggagctgacgggcagc
agcgtcttcgactacatccatcccggggaccactcggaggtgttggagcaactggggctg
cgggctgcaactcccgggccccccacgccaccttccgtgtcctcttcttcctcctcctcg
tcttcctcctcgctggtggacactcccgagattgaagccagccctaccgaggcatcccct
accttccgggtccaggagcgttccttcttcgtccgcatgaaatccaccctcacgaagagg
ggcctgaatgtcaaagcctcaggttataaggtcattcacgtgacagggcgcctgaggtcc
cgagccctgggtcttgtggcacttggacacacactgcccccagccccgctggctgagctg
cctctgcacggacacatgattgtcttccgcctcagcctgggcctcaccatcctagcttgt
gagagcagagttagcgaccatatggacatgggaccctcggagctggtgggacgcagctgc
taccagtttgtccatggacaggatgcaaccaggatccgtcaaagtcacctggacctgctg
gacaaaggtcaggtggtgactggttactaccgttggctgcagcgtgcggggggcttcgtg
tggctgcagtctgtggccactgtggccgggaacgggaagagtgccggggagcatcacgtt
ctgtgggtcagtcacgtgctcagccatgctgaagagggccaaacacccctggatgccttc
cagcttccagccactgtgtctcatgaggatccatcgagcccaggcccagagtccacagag
gacgagcctccagttgacccgaagcaggctgcctctgtggaccaggataaggacaagaac
cctcagacccgaggcaaacgtatcaaggtggagcctggcccaaaggaagctaggggctcc
gaggacagtggagacgaggagctctctgatccgccggccacacctcggccagaattcact
tctgtcatccgggcgggggccctgaagcatgatgcagtactcccgtggggcctgacaact
cctggggagccctcgcctgccctccttcacgcaggcttcctgccaccggtggtgaggggc
ctgtgcacgccgggcaccatccgctatggccctgcagagttgagcctgatgtatccacat
ctgcacaggctgggtccaggccccacgctcccggaggccttttaccctacgctgggcctg
ccctacccagggcccacaggtactagggtgcagcggaagggagactga
DBGET
integrated database retrieval system
