Arvicola amphibius (Eurasian water vole): 119820748
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Entry
119820748 CDS
T08327
Symbol
Sned1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119820748 (Sned1)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119820748 (Sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
EGF_2
fn3
EGF_CA
Fn3_Dep-1_4th
cEGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119820748
NCBI-ProteinID:
XP_038195243
LinkDB
All DBs
Position
8:complement(98583893..98637384)
Genome browser
AA seq
1413 aa
AA seq
DB search
MRSGAAWALLLTAALGLGARGVRSAVPLADFYPFGTKRGDAVTPKQDDGGSGLQPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPSMLQRATEDIRRYFPELPDFSATWVFVATWYRVTFFGGSSSSPVNTFQIVLITDGR
FSFTIFNYETILWTTGTHASSGGDADGLGGIAAQAGFNAGDGHRYFNIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL
AGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFSCQCPVGFKGLTCESAQPPCDNKVCQN
GGQCQAESSSAACVCQAGYTGATCEIDVDECSSDPCLNGGSCLDLVGNYSCVCVQPFEGP
RCETGSYPVPSPCLSNPCQNGGTCVDADPGYVCECPEGFMGLDCTERIPNDCECRNGGRC
LSANTTLCQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNISHS
LPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGRHCEKARPHLCSSGPCRNGGTCKETGN
EYHCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCETAPSP
CFWSPCMNGGTCEDLGADFFCHCQPGYTGHRCQAEVDCGRPEEVKHATMRFNGTHMGSVA
LYTCDRGFSLSALGHMRVCQPQGVWSQPPQCIEVDECRSQPCLHGGSCQDLPAAYQCLCS
PGYEGVHCELETDECHAQPCRNGGSCRDLPXAFICQCPEGFTGXHCETEVDACASSPCQH
GGRCEDGGGAYLCVCPEGFFGYHCETVSDPCFSSPCGGRGYCLASNGXHSCTCKVGYTGK
DCTKELLPPTALRVERVEESGVSISWSPPEGTTARQVLDGYAVTYASSDGSSRRTDFVDR
SRSSPQLRALAAGRAYNISVFLRQTKHQQQNDISRPAALLNPHPXEPRPVEDFEVTNISA
NAISVQWALHRIQHATVSRVRVXILYPEASVAQSTEVDRSVDRLTFGDLLPGRRYTVRLT
TLSGPGGAEHPTESLASAPLNVWTRKALPPANLTALSSQQTPLPTWYGDAPAPGISLEAY
VINVTTSQAPRGRYIPNGKLVSNTVRDLLPGRRYQLSVTAVQSTEQGQLHSKPAHLYIIT
STRDGTDRRWHQGGHHLRMLRNRPAPVRLPELRLLNDHSAPETPTQPPRFSELVDGRARV
SARFGGLPSKSVTVRSQPTTPVPLKNTEEAPEQVRLALQLSNSSSKDPESAPGSCXEDAC
QNGGTCVPGANAHSCDCRPGFKGRHCELACEKVPSPCTRLFSETKSFPVWEGDVCHHVYK
KVYKVHQDICFKERCESTSLRKPQAGNKVTVKH
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcggcgccgcatgggcgctgctgctgaccgcagccctggggctcggggcgcgc
ggggtgcgctctgcggtgcccctcgctgacttctacccgttcggtacgaagcgtggcgac
gccgtaaccccaaagcaggacgacggcggctcagggctgcagcccctctcggtgcccttc
ccgttcttcggcgccgagcactccggactctacgtgaacaataacgggatcatctccttc
ctgaaggaggtttctcagttcacccctgtggccttccccattgccaaagaccgctgtgtg
gtagcagccttctgggcagatgtggacaaccgacgtgcaggcgacgtctactaccgggaa
gccactgacccgtccatgctacagagagccacagaggacatcagacggtactttcctgag
ctcccggacttctcggctacctgggtttttgttgccacctggtaccgcgtgaccttcttt
ggaggcagctcctcttcccccgtcaacacattccaaatagtgctcatcaccgatggccgg
ttctctttcaccattttcaactacgagaccatcctgtggaccacaggcacacatgccagc
agcgggggtgatgctgacggcttgggaggcatcgcagcccaggcaggtttcaacgcaggt
gatgggcaccgttacttcaacatccctgggtcacgcacagcagacatggctgaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgtttagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctctgtgtgcctggccctgcgtccatgcctcaat
ggcggcaagtgcatcgatgactgcgtcacaggcaacccctcctacacctgctcctgcctc
gcgggcttcacagggcggagatgccacctggatgtaaacgagtgtgcctcccacccatgc
caaaatggtgggacctgcacccacggtgtcaacagcttcagctgccagtgccccgtcggc
ttcaagggactcacctgtgaatcagcccagcctccctgtgacaacaaagtgtgtcaaaat
ggcggccagtgccaggctgagagcagctccgcagcatgtgtgtgccaggctgggtacact
ggggccacctgtgagatagatgtggatgaatgcagctccgacccatgcctgaatggaggg
tcatgccttgacctggttggaaactacagctgtgtttgtgtgcagcccttcgagggacct
cgatgtgagacaggaagctacccggtgccttccccctgcctctccaacccctgccagaat
gggggcacctgtgtggatgcggatccgggatacgtgtgcgagtgccctgaaggcttcatg
ggcttggactgcacagagaggatccccaatgactgcgagtgccggaacggaggcagatgc
ctgagtgccaacaccaccctctgccagtgtcctccgggcttctttgggctcctttgtgaa
tttgaagtcacagccacaccctgcaacatgaacacgcagtgtccagacggaggctactgc
atggagtacggcgggagctacctatgcgtctgccacacagaccacaacatcagccactct
ctgccgtcaccctgcgactcagacccttgctttaatggaggctcctgtgatgcccacgac
gactcctatacatgcgagtgcccacgtggattccacggcaggcactgcgagaaagcccgg
ccacatctctgcagctcggggccctgccggaatgggggcacatgcaaagaaacaggcaat
gagtaccactgcacctgcccttatcgcttcaccgggagacactgtgagattggaaagcca
gactcctgtgcctctggtccctgtcacaatggtggcacttgttttcactacattggcaaa
tacaagtgtgactgccctccaggcttctctgggcggcactgcgagacagccccctccccc
tgcttctggagcccatgcatgaatgggggtacctgtgaggatctaggagcagatttcttc
tgccactgccagccagggtatacaggacaccggtgtcaggcagaggtggactgtggtcgc
cctgaggaggtgaagcatgcaaccatgcgcttcaatggaactcacatgggctcagtggcc
ctatacacatgtgaccgtggcttcagcctgagtgctctcggccacatgcgtgtctgccag
ccacaaggtgtctggagtcagcctccccagtgcattgaagtagacgagtgccggtctcag
ccatgcctgcatggaggctcctgccaggacctccccgctgcttaccagtgcctctgcagc
ccagggtacgaaggagtccactgtgagctagagacagacgagtgccacgcacagccctgt
agaaatggaggttcctgcagggacctcccgngggctttcatctgccagtgccctgaaggt
ttcactgganatcactgtgaaacagaggtggacgcctgtgcctccagcccctgccagcat
ggaggccggtgtgaggacggtggtggggcctacctgtgcgtgtgtccagagggcttcttt
ggctaccactgcgagacagtgagtgacccctgcttctctagcccctgtgggggccgcggc
tactgcttggccagcaacgggntccacagctgtacctgcaaagtgggctacacaggcaag
gactgcaccaaagagctcctcccaccaacagctctcagggtagagagggtggaggagagt
ggggtctccatctcctggagcccacctgagggcaccacagccagacaggtgctggacggc
tatgcagttacctacgcctcctcggacggatcctcccggcgcacagacttcgtggaccgg
agccgctcctctccacagctgcgagccctagcagccggccgtgcctacaatatctctgtg
tttctccgtcaaacgaaacaccaacaacaaaacgacatcagcaggcccgcagcgctgctc
aacccgcacccgtgagaaccccgccctgtggaagactttgaggtcaccaacatttcagcc
aatgccatctcagtgcagtgggctctccacaggatccagcatgctactgtcagcagggtt
cgagtgntcatcctctaccctgaggcctcagtggcccagtccactgaggtagacaggagt
gtggaccgactcacatttggggacctgctgccaggaagaagatacaccgtaaggctaacc
accctcagtgggcctggaggagccgagcaccctactgagagcctggcctcagcaccactg
aatgtgtggacccgtaaggccttgcctccagcgaacctgactgccctctcgagtcaacag
acacctctgcccacatggtatggggacgcccccgctccaggtatctcactggaagcttat
gtcatcaatgtgaccaccagtcaggcaccaagaggccgctacatccccaatgggaagctg
gtgtccaacacggtgcgggacctgctgccaggccggcggtaccagctctcagttacggct
gtgcagagcacggagcagggccagctgcacagcaagcctgcacatctctacatcatcacc
tccaccagggatggcactgacagacgttggcaccagggaggacaccacctacggatgctc
agaaacagaccagcccccgtgcgccttccagagctgcgcctgctcaatgaccacagtgcc
cctgaaacaccaactcagccgcccaggttctcagagcttgtagatggaagagcaagagtg
agtgccaggtttggtggcttacccagcaaatcagtcactgtgagatcacagcccaccact
ccggtgccgctcaagaacacagaggaggcccctgagcaggtccgcctggccctccagcta
tccaacagcagcagcaaggacccagaaagtgcccctggtagctgtntcgaagatgcctgt
cagaatggaggcacctgtgtgccaggtgccaatgcccacagctgtgactgcaggcctggg
ttcaaaggcagacactgtgagcttgcctgtgagaaagtgccctcgccctgcacacggctg
ttctcagagacaaagtcgttccctgtctgggaaggagatgtctgccaccatgtgtataag
aaagtctacaaagttcaccaggacatctgctttaaagagcgctgtgagagcacaagcctc
aggaaaccccaagcaggaaacaaagtaacagtcaaacactga
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