Arvicola amphibius (Eurasian water vole): 119820890
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Entry
119820890 CDS
T08327
Symbol
Hif3a
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119820890 (Hif3a)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119820890 (Hif3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
119820890
NCBI-ProteinID:
XP_038195522
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Position
8:complement(71478498..71507072)
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AA seq
664 aa
AA seq
DB search
MALGLQRMRSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHRLCAAGEWNQVGTGGEPLDACYLKALEGFVMVLTAEGDMVYLSENVSKHLGLS
QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKLEAPTERHFSLRMKSTLTSRGRTLN
LKAATWKVLHCSGHMRAYKPPAQTSPTGSPRSEPPLQCLVLICEAIPHPSSLEPPLGRGA
FLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAV
TGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRVEETGVVLSLEQTEQHT
RRPPQRGTSSQKGIPGNSLDPPAPRILAFLHPPALSEASLAADPRRFCSPDLRRLMAPIL
DGHPIAATPSTPQATRRPQSPLPADLPDQLLGGLENAYRLSTARKNKTVETDLDKAQDPD
TLDLEMLAPYISMDDDFQLNSSEQLPRTHRRPPGVARRPRARSFHGLSPPIPEPSLLPRW
GSDPRLNCSSPSRGALPTASLMPGTRKRALAQSSEDKGMEQLETKPAKRSPSLEPGSFRL
PPLSLSFLLQGRQFPGNQQDPRTPLLDSHEALGLAPSLLSLYQHEETTQPRNHVQPAAGL
AQAH
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggggctgcagcgcatgaggtctagcaccgagctgcggaaggagaagtcgagg
gatgctgcgcgcagccggcgcagccaggagacggaggtactgtaccagctggcgcacacg
ctgcctttcgcgcgcggcgtcagcgcgcatctggacaaggcctccatcatgcgcctcacc
atcagctacctgcgcatgcaccgcctctgcgctgcaggggagtggaaccaggtgggaaca
gggggagagccactggacgcctgctacctgaaggccctcgaggggttcgtcatggtgctc
accgccgagggagacatggtttacctgtcggaaaatgtcagcaagcacctgggcctcagt
cagctggagctcatcggacacagtatctttgattttattcatccctgtgaccaagaggaa
ctccaggatgccctgacccccaggccaagtctgtccaagaagaagctggaagcccccaca
gagcgccacttttccttgcgcatgaaaagcacactcaccagcagggggcgcacgctcaac
ctcaaagctgccacttggaaggtgctgcactgctcaggacatatgagggcctacaagccc
cctgcgcagacttctcccaccgggagccctcgctccgagcctccccttcaatgcctggtg
cttatctgtgaagccatcccccacccatccagtctggagccccctctgggacgaggggcc
tttctcagccgccacagcctggacatgaagttcacatactgcgacgagaggatcgcagaa
gtcgctggctatagccccgatgacctgattggctgttctgcttatgaatacatccatgca
ctggactctgatgcagtcagcaggagcatccacactttgctgagcaagggccaggcagta
acaggacagtatcgcttcctggcccggactggaggctacctgtggactcagactcaggct
acagtggtgtcagggggacggggcccccagtcagaaagtatcatctgtgtccacttccta
atcagccgggtagaagagacaggagtggtgctgtccctggaacaaacagagcaacacact
cgtagaccccctcagcggggtacctcctcacagaagggtattcctggcaacagtctagac
ccacctgctccccggattctggccttcctgcaccctccggccctgagtgaggcctccctg
gctgctgaccctcgccgtttctgtagcccagacctgcgccgccttatggcacccattctg
gatgggcatcccatagctgccacccccagcaccccacaggctacacgtcgaccccaaagt
cctcttccggctgatctcccagatcagttgcttgggggcttagagaatgcatacagactc
tccactgccaggaaaaacaagactgtggagacagatctagataaagctcaggaccctgac
actctggacttggagatgctggctccctacatctccatggatgatgacttccagctcaac
tccagcgagcaattgcccagaacccaccgcagacctcctggggtggcccgcagaccccgt
gctcggagcttccacggcctgtcgccccccatccctgagccctccctgctgccccgctgg
gggagtgatccacgactcaactgctccagcccctccaggggggccctccctacagcctcc
ctaatgcctgggactcgaaagagggccctggcccagagctcagaggacaaagggatggag
cagctggaaacaaagcccgccaagcggtctcccagcctggaacctggaagcttccgattg
cctcccctcagcctgagtttccttctgcaaggacgacagttcccagggaaccagcaggat
cccagaaccccactcctggattcccatgaggccttgggactagctccctcgctgctctct
ctctaccagcatgaagaaactacacagcccaggaaccacgtccaaccagcggcaggcttg
gcccaggcccactga
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