Arvicola amphibius (Eurasian water vole): 119820932
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Entry
119820932 CDS
T08327
Symbol
Lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119820932 (Lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119820932 (Lrfn1)
Cell adhesion molecules [BR:
aamp04515
]
Immunoglobulin superfamily
SALM family
119820932 (Lrfn1)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119820932 (Lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
119820932
NCBI-ProteinID:
XP_038195596
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All DBs
Position
8:77856282..77872105
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AA seq
763 aa
AA seq
DB search
MAPGLFSPTPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAIDR
RVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRL
AEVRGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQM
VNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPL
TVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQA
GGKALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDS
GTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATE
RRLVAAELTSSSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAA
GRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIV
ASVLVFIVLLMIRYKVYGDGDSRRIKGTSRSPPRVSHVCSQTNGAGSGSQQPSAPPAPDR
YEALREVAVPAAIEAKATEAEATSTELEVVLGRSLGGSATSLCLLPSEETSGEESRAVTG
PRRSRSGALGPPTSAPPTLALVPGGAPARPRPQQRYSFDGDYGALFQSHSYPRRARRTKR
HRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggctccagggctcttctcgccaacacctgctgctcttccctttctgctgctgctctgg
gcaggggcatctcggggccagccctgccccggtcgctgcatctgccagaacgtggcacct
acgctgaccatgctgtgtgccaagactggtctgctcttcgtgccacccgccatcgacagg
cgcgtggtagagctgaggctcactgacaatttcattgcggctgtgcgtcgtcgagacttt
gccaacatgaccagcctggtccacctcaccctgtctcgcaacactattggtcaggtggca
gccggcgcctttgctgaccttcgtgctctcagggccctgcacctcgacagcaaccgcctg
gcagaggtacgcggagaccagctccggggcttgggtaacctccgccacttgatcctgggt
aacaatcagatccgtaaggtggagtcggcagcttttgacgccttcctgtccactgtggag
gatctggatctgtcctacaacaacctggaggcactgccgtgggaggcggtgggtcagatg
gtgaacttgaacaccctcactctggaccacaacctcattgatcatattgccgagggtacc
ttcgtgcagctgcacaaactcgtgcgcttggacatgacttctaaccgtctgcataaactg
ccccccgacgggcttttcctgaggtcccagggtggtgggcccaagccacccaccccactg
accgtcagctttggtggcaatccgctgcattgcaactgtgaactgctctggctgcggcgc
ctgaccagggaggatgacttggagacatgtgccacgcctgagcatctcactgaccgctac
ttctggtccatcccagaggaggaatttctgtgtgagcccccgctcatcacgcggcaggca
gggggcaaggccctggtagtagagggccaggctgttagtctgcgctgccgggcggtgggt
gaccctgagcccgtggtgcattgggtggcacctgatgggcggctgctggggaactccagc
cggacccgggtccgtggggatggaacgctggatgtgaccatcaccaccttgagggacagc
ggtaccttcacttgcatagcctccaatgctgcgggggaagccactgcaccggtggaggta
tgtgtggtacctctgccactgatggcgcccccgcctgctgccccaccgcctctcactgag
cctggttcttctgacatcgccacaccaggccgacctggtgccaatgattcagccactgaa
cgccggcttgtggctgctgaactcacatccagctccgtgctcatccgctggccggcccag
aggccagtgcctggcatccgcatgtaccaagtgcaatacaacagctctgcggatgactct
ctggtctacaggatgatcccatctaccagccagaccttcctggtgaatgatctggcggct
ggccgcgcctatgacttgtgtgtgctggcagtctacgacgacggggccaccgctctgccg
gctaccagagtggtgggctgtgtgcagttcaccacggcgggagatcccgcaccgtgccgc
ccgctgagggctcacttcttgggcggtaccatgatcatcgccatcgggggcgtcattgta
gcctcggtcctcgttttcatcgttctactcatgattcgctacaaggtgtacggcgatggg
gacagccgtcgcatcaagggcacgtccaggtcgccccctcgggtcagccacgtgtgctct
cagaccaacggagccggctcgggctcgcagcagccctctgccccaccggctccagaccgc
tacgaggcgctgcgggaggtggcggtccctgcagccattgaggcaaaggcaaccgaggca
gaggcgacttctactgagctagaggtggtgctgggacgctctctgggtggctcggccacc
tcgctgtgcttgctgccctccgaggaaacttctggggaggaatctagagccgtaactggt
cctcgaaggagccgttcgggggccttggggcctccaacttcagcgcccccgacgctagct
ctggttcctgggggagccccggcccgaccgaggccacaacaacgctattcctttgacggg
gactacggagcgctattccagagccacagttacccgcgccgcgcccgccggacaaagcgc
caccggtccacgccacacctggacggggccggagggggcgcggccggggaagatggagac
ctggggctgggctccgcccgggcacgcctggccttcaccagcaccgaatggatgctggag
agtaccgtgtga
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