Arvicola amphibius (Eurasian water vole): 119821064
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Entry
119821064 CDS
T08327
Symbol
Samd4b
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119821064 (Samd4b)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119821064 (Samd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
PHAT
Vts1
SAM_2
VBS
Motif
Other DBs
NCBI-GeneID:
119821064
NCBI-ProteinID:
XP_038195823
LinkDB
All DBs
Position
8:complement(77800694..77839455)
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AA seq
687 aa
AA seq
DB search
MMFRDQVGILASWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES
EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE
ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRTRPEPSYHSRQGSDEWGGPAE
LTPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLI
PTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG
MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ
SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATPTAKDGGRGEPLLPGAEPPL
THPGTDKGTEAKDPPAAENYPSPPAPAPTDSSEPAPAPVADGDIPSQFTRVMGKVCTQLL
VSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALDMQNYRQ
QKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTS
PSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGPDLE
INPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaagtaggcatcctcgctagctggttcaagggctggaatgaatgt
gagcagacagtggctctgctgtcgcttctgaagcgggtcacccgtacccaagcccgcttt
ctgcagctctgcctggaacactcgctggcggactgcaatgatatccacctgctggagtca
gaggccaacagtgctgccatcgtcagccaatggcaacaggagtccaaagagaaggtggta
tccctcttactatcccacctgcccctactccaaccaggcaacacagaggccaagtccgag
tacatgagactgctgcagaaggtgctggcctactccatcgagagcaatgccttcattgag
gagagccgccaactcctctcctatgccctcatccacccagccaccacgctggaggaccgc
aatgcgctcgccctctggttgagccatctggaagagcggctggctagtggttttcgcacc
cgaccagagccctcctaccattcacgccagggctcagatgagtgggggggacctgcagag
ctgacccctggagaggcaggaccaggctggcaggacaagccaccccgagaaaatggacat
gtacccttccacccatccagctcagtgccgccggccatcaacagtattgggagcaatgca
aacacaggtctcccctgccaaatccaccctagcccgctgaagcgctccatgtcactcatc
cctacaagcccccaggcccctggtgagtggccgagtccagaggagcttggggcccgggct
gctttcaccacgcccgaccacgcacccctctcgccacagagcagtgtggcctcctctggc
agtgagcagacggaggagcagggctccagccggaacactttccaggaggatggcagcggg
atgaaagatgtgccctcatggctcaagagcctccgcttgcacaagtatgctgctttgttc
tcacagatgagctatgaagagatgatgaccctaacagagcagcacctagagtcgcagaat
gtcaccaaaggtgcccggcacaagatagccctgagcatccagaagcttcgtgaaagacag
agcgtcctcaagtccctggagaaggatgtgctggaaggtggcaatctgcggaacgctctg
caggaactgcagcagatcatcatcacccctatcaaggcctacagtgtccttcaggccacc
cctactgccaaggatgggggtcggggggagccgctactgccaggtgctgagcctcccctc
acccatcctggaacagacaagggcactgaggccaaggaccctccagctgcagagaactat
ccttctccaccagctccagctcccactgatagcagtgagccagctccagctcccgtcgcc
gacggagacatccccagccagtttacacgggtgatgggcaaagtatgcacccagctgctg
gtgtcccgaccagatgaggagaacatcactagttacctccagctcatcgaaaagtgcctg
actcatgaggctttcacagagacacagaagaagcggctgctgtcctggaaacagcaagtg
ctgaaactcctccggacatttccgcgaaaagctgcattagacatgcagaactaccggcag
cagaagggctgggcatttggctccaactcactccccatagctggctctgtggggatgggt
gtggcccggcggacccagcggcagttcccaatgcctcctcgggccctcccacctggcagg
atgggcctcctgagcccttcaggcattgggggtgtctctcctcgacatgcccttaccagc
cccagtcttgggggtcagggccgacagaacctgtggtttgccaaccctggaggcagtaac
agcatgcccagccagagccgcagctctgtgcagcgtactcactcgctcccagtccactcg
tcaccccaggctattctcatgttccctccagactgcccggtacctgggcctgacctggag
atcaatcccaccctggagtctctgtgtctgagcatgacagaacacgccttgggtgatggg
acagacaaaacctccaccatctga
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